DNA Repair by Reversal of DNA Damage

被引:95
作者
Yi, Chengqi [1 ,2 ]
He, Chuan [3 ,4 ]
机构
[1] Peking Univ, State Key Lab Prot & Plant Gene Res, Sch Life Sci, Beijing 100871, Peoples R China
[2] Peking Tsinghua Ctr Life Sci, Beijing, Peoples R China
[3] Univ Chicago, Dept Chem, Chicago, IL 60637 USA
[4] Univ Chicago, Inst Biophys Dynam, Chicago, IL 60637 USA
来源
COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY | 2013年 / 5卷 / 01期
关键词
HUMAN ALKB HOMOLOG; NUCLEOTIDE EXCISION-REPAIR; SINGLE-STRANDED-DNA; HUMAN O-6-ALKYLGUANINE-DNA ALKYLTRANSFERASE; TEMOZOLOMIDE PLUS O-6-BENZYLGUANINE; CHEMICAL CROSS-LINKING; COLI ADAPTIVE RESPONSE; OBESITY-ASSOCIATED FTO; ESCHERICHIA-COLI; TRANSFER-RNA;
D O I
10.1101/cshperspect.a012575
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Endogenous and exogenous factors constantly challenge cellular DNA, generating cytotoxic and/or mutagenic DNA adducts. As a result, organisms have evolved different mechanisms to defend against the deleterious effects of DNA damage. Among these diverse repair pathways, direct DNA-repair systems provide cells with simple yet efficient solutions to reverse covalent DNA adducts. In this review, we focus on recent advances in the field of direct DNA repair, namely, photolyase-, alkyltransferase-, and dioxygenase-mediated repair processes. We present specific examples to describe new findings of known enzymes and appealing discoveries of new proteins. At the end of this article, we also briefly discuss the influence of direct DNA repair on other fields of biology and its implication on the discovery of new biology.
引用
收藏
页数:18
相关论文
共 142 条
  • [41] A methylation-dependent electrostatic switch controls DNA repair and transcriptional activation by E-coli Ada
    He, C
    Hus, JC
    Sun, LJ
    Zhou, P
    Norman, DPG
    Dötsch, V
    Wei, H
    Gross, JD
    Lane, WS
    Wagner, G
    Verdine, GL
    [J]. MOLECULAR CELL, 2005, 20 (01) : 117 - 129
  • [42] RNA epigenetics?
    He, Chuan
    [J]. NATURE CHEMICAL BIOLOGY, 2010, 6 (12) : 863 - 865
  • [43] Tet-Mediated Formation of 5-Carboxylcytosine and Its Excision by TDG in Mammalian DNA
    He, Yu-Fei
    Li, Bin-Zhong
    Li, Zheng
    Liu, Peng
    Wang, Yang
    Tang, Qingyu
    Ding, Jianping
    Jia, Yingying
    Chen, Zhangcheng
    Li, Lin
    Sun, Yan
    Li, Xiuxue
    Dai, Qing
    Song, Chun-Xiao
    Zhang, Kangling
    He, Chuan
    Xu, Guo-Liang
    [J]. SCIENCE, 2011, 333 (6047) : 1303 - 1307
  • [44] Bacterial cryptochrome and photolyase:: characterization of two photolyase-like genes of Synechocystis sp PCC6803
    Hitomi, K
    Okamoto, K
    Daiyasu, H
    Miyashita, H
    Iwai, S
    Toh, H
    Ishiura, M
    Todo, T
    [J]. NUCLEIC ACIDS RESEARCH, 2000, 28 (12) : 2353 - 2362
  • [45] Eukaryotic Class II Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals Basis for Improved Ultraviolet Tolerance in Plants
    Hitomi, Kenichi
    Arvai, Andrew S.
    Yamamoto, Junpei
    Hitomi, Chiharu
    Teranishi, Mika
    Hirouchi, Tokuhisa
    Yamamoto, Kazuo
    Iwai, Shigenori
    Tainer, John A.
    Hidema, Jun
    Getzoff, Elizabeth D.
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (15) : 12060 - 12069
  • [46] Functional motifs in the (6-4) photolyase crystal structure make a comparative framework for DNA repair photolyases and clock cryptochromes
    Hitomi, Kenichi
    DiTacchio, Luciano
    Arvai, Andrew S.
    Yamamoto, Junpei
    Kim, Sang-Tae
    Todo, Takeshi
    Tainer, John A.
    Iwai, Shigenori
    Panda, Satchidananda
    Getzoff, Elizabeth D.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (17) : 6962 - 6967
  • [47] Structural and Mutational Analysis of Escherichia coli AlkB Provides Insight into Substrate Specificity and DNA Damage Searching
    Holland, Paul J.
    Hollis, Thomas
    [J]. PLOS ONE, 2010, 5 (01):
  • [48] Structural studies of human alkyladenine glycosylase and E-coli 3-methyladenine glycosylase
    Hollis, T
    Lau, A
    Ellenberger, T
    [J]. MUTATION RESEARCH-DNA REPAIR, 2000, 460 (3-4): : 201 - 210
  • [49] A two-step nucleotide-flipping mechanism enables kinetic discrimination of DNA lesions by AGT
    Hu, Jie
    Ma, Ao
    Dinner, Aaron R.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (12) : 4615 - 4620
  • [50] Structure of a covalently trapped catalytic complex of HIV-I reverse transcriptase: Implications for drug resistance
    Huang, HF
    Chopra, R
    Verdine, GL
    Harrison, SC
    [J]. SCIENCE, 1998, 282 (5394) : 1669 - 1675