Three-dimensional structure of toxin OSK1 from Orthochirus scrobiculosus scorpion venom

被引:48
作者
Jaravine, VA [1 ]
Nolde, DE [1 ]
Reibarkh, MJ [1 ]
Korolkova, YV [1 ]
Kozlov, SA [1 ]
Pluzhnikov, KA [1 ]
Grishin, EV [1 ]
Arseniev, AS [1 ]
机构
[1] RUSSIAN ACAD SCI,SHEMYAKIN & OVCHINNIKOV INST BIOORGAN CHEM,MOSCOW 117871,RUSSIA
关键词
D O I
10.1021/bi9614390
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A 600 MHz H-1 NMR study of toxin OSK1, blocker of small-conductance Ca2+-activated K+ channels, is presented. The unambiguous sequential assignment of all the protons of the toxin was obtained using TOCSY, DQF-COSY, and NOESY experiments at pH 3.0 (10, 30, and 45 degrees C) in aqueous solution. (3)J(N alpha), (3)J(alpha beta) vicinal spin coupling constants were determined in high-resolution spectra. The cross-peak volumes in NOESY spectra and the coupling constants were used to define the local structure of the protein by the program HABAS and to generate torsion angle and interproton distance constraints for the program DIANA. Hydrogen-deuterium exchange rates of amide protons showed possible locations of hydrogen bonds. The hydrogen bond accepters and disulfide bridges between residues 8-28, 14-33, and 18-35 were determined when analyzing distance distribution in preliminary DIANA structures. All constraints were used to obtain a set of 30 structures by DIANA. The resulting rms deviations over 30 structures are 1.30 Angstrom for the heavy atoms and 0.42 Angstrom for the backbone heavy atoms. The structures were refined by constrained energy minimization using the SYBYL program. Their analysis indicated the existence of the alpha-helix (residues 10-21) slightly distorted at the Cys14 residue, two main strands of the antiparallel beta-sheet (24-29, 32-38), and the extended fragment (2-6). The motif is stabilized by the disulfide bridges in the way, common to all known scorpion toxins. Using the fine spatial toxin structure, alignment of the homologues, mutagenesis analysis, and comparison of scorpion toxin family functions, we delineate some differences significant for the toxin specificity.
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页码:1223 / 1232
页数:10
相关论文
共 41 条
[1]   CHARYBDOTOXIN BLOCK OF SINGLE CA-2+-ACTIVATED K+ CHANNELS - EFFECTS OF CHANNEL GATING, VOLTAGE, AND IONIC-STRENGTH [J].
ANDERSON, CS ;
MACKINNON, R ;
SMITH, C ;
MILLER, C .
JOURNAL OF GENERAL PHYSIOLOGY, 1988, 91 (03) :317-333
[2]   2-DIMENSIONAL SPECTROSCOPY - APPLICATION TO NUCLEAR MAGNETIC-RESONANCE [J].
AUE, WP ;
BARTHOLDI, E ;
ERNST, RR .
JOURNAL OF CHEMICAL PHYSICS, 1976, 64 (05) :2229-2246
[3]   HYDROGEN-BONDING IN GLOBULAR-PROTEINS [J].
BAKER, EN ;
HUBBARD, RE .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 1984, 44 (02) :97-179
[4]  
BARTELS C, 1995, IN PRESS J BIOMOL NM
[5]   SEQUENTIAL RESONANCE ASSIGNMENTS IN PROTEIN H-1 NUCLEAR MAGNETIC-RESONANCE SPECTRA - COMPUTATION OF STERICALLY ALLOWED PROTON PROTON DISTANCES AND STATISTICAL-ANALYSIS OF PROTON PROTON DISTANCES IN SINGLE-CRYSTAL PROTEIN CONFORMATIONS [J].
BILLETER, M ;
BRAUN, W ;
WUTHRICH, K .
JOURNAL OF MOLECULAR BIOLOGY, 1982, 155 (03) :321-346
[6]   RESTRAINED ENERGY REFINEMENT WITH 2 DIFFERENT ALGORITHMS AND FORCE-FIELDS OF THE STRUCTURE OF THE ALPHA-AMYLASE INHIBITOR TENDAMISTAT DETERMINED BY NMR IN SOLUTION [J].
BILLETER, M ;
SCHAUMANN, T ;
BRAUN, W ;
WUTHRICH, K .
BIOPOLYMERS, 1990, 29 (4-5) :695-706
[7]   CALCIUM-ACTIVATED POTASSIUM CHANNELS [J].
BLATZ, AL ;
MAGLEBY, KL .
TRENDS IN NEUROSCIENCES, 1987, 10 (11) :463-467
[8]   ANALYSIS OF SIDE-CHAIN ORGANIZATION ON A REFINED MODEL OF CHARYBDOTOXIN - STRUCTURAL AND FUNCTIONAL IMPLICATIONS [J].
BONTEMS, F ;
GILQUIN, B ;
ROUMESTAND, C ;
MENEZ, A ;
TOMA, F .
BIOCHEMISTRY, 1992, 31 (34) :7756-7764
[9]   REFINED STRUCTURE OF CHARYBDOTOXIN - COMMON MOTIFS IN SCORPION TOXINS AND INSECT DEFENSINS [J].
BONTEMS, F ;
ROUMESTAND, C ;
GILQUIN, B ;
MENEZ, A ;
TOMA, F .
SCIENCE, 1991, 254 (5037) :1521-1523