Deep Learning-Based Classification of Inherited Retinal Diseases Using Fundus Autofluorescence

被引:31
作者
Miere, Alexandra [1 ,2 ]
Le Meur, Thomas [3 ]
Bitton, Karen [1 ]
Pallone, Carlotta [1 ]
Semoun, Oudy [1 ]
Capuano, Vittorio [1 ]
Colantuono, Donato [1 ]
Taibouni, Kawther [2 ]
Chenoune, Yasmina [2 ,4 ]
Astroz, Polina [1 ]
Berlemont, Sylvain [3 ]
Petit, Eric [2 ]
Souied, Eric [1 ]
机构
[1] Ctr Hosp Intercommunal Creteil, Dept Ophthalmol, F-94010 Creteil, France
[2] Univ Paris Est Creteil, Lab Images Signals & Intelligent Syst LISSI, EA 3956, F-94400 Vitry Sur Seine, France
[3] Keen Eye Technol SAS, F-75012 Paris, France
[4] ESME Sudria, F-69002 Lyon, France
关键词
retinal imaging; artificial intelligence; deep learning; inherited retinal diseases; fundus autofluorescence; MACULAR DEGENERATION; GEOGRAPHIC ATROPHY; STARGARDT DISEASE; PROGRESSION; DYSTROPHY; PATTERNS;
D O I
10.3390/jcm9103303
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background. In recent years, deep learning has been increasingly applied to a vast array of ophthalmological diseases. Inherited retinal diseases (IRD) are rare genetic conditions with a distinctive phenotype on fundus autofluorescence imaging (FAF). Our purpose was to automatically classify different IRDs by means of FAF images using a deep learning algorithm. Methods. In this study, FAF images of patients with retinitis pigmentosa (RP), Best disease (BD), Stargardt disease (STGD), as well as a healthy comparable group were used to train a multilayer deep convolutional neural network (CNN) to differentiate FAF images between each type of IRD and normal FAF. The CNN was trained and validated with 389 FAF images. Established augmentation techniques were used. An Adam optimizer was used for training. For subsequent testing, the built classifiers were then tested with 94 untrained FAF images. Results. For the inherited retinal disease classifiers, global accuracy was 0.95. The precision-recall area under the curve (PRC-AUC) averaged 0.988 for BD, 0.999 for RP, 0.996 for STGD, and 0.989 for healthy controls. Conclusions. This study describes the use of a deep learning-based algorithm to automatically detect and classify inherited retinal disease in FAF. Hereby, the created classifiers showed excellent results. With further developments, this model may be a diagnostic tool and may give relevant information for future therapeutic approaches.
引用
收藏
页码:1 / 13
页数:13
相关论文
共 37 条
  • [1] Pivotal trial of an autonomous AI-based diagnostic system for detection of diabetic retinopathy in primary care offices
    Abramoff, Michael D.
    Lavin, Philip T.
    Birch, Michele
    Shah, Nilay
    Folk, James C.
    [J]. NPJ DIGITAL MEDICINE, 2018, 1
  • [2] Molecular genetics and prospects for therapy of the inherited retinal dystrophies
    Bessant, DAR
    Ali, RR
    Bhattacharya, SS
    [J]. CURRENT OPINION IN GENETICS & DEVELOPMENT, 2001, 11 (03) : 307 - 316
  • [3] Increased Fundus Autofluorescence and Progression of Geographic Atrophy Secondary to Age-Related Macular Degeneration: The GAIN Study
    Biarnes, Marc
    Arias, Luis
    Alonso, Jordi
    Garcia, Miriam
    Hijano, Miriam
    Rodriguez, Anabel
    Serrano, Anna
    Badal, Josep
    Muhtaseb, Hussein
    Verdaguer, Paula
    Mones, Jordi
    [J]. AMERICAN JOURNAL OF OPHTHALMOLOGY, 2015, 160 (02) : 345 - 353
  • [4] A STUDY OF RETINITIS PIGMENTOSA IN THE CITY OF BIRMINGHAM .1. PREVALENCE
    BUNDEY, S
    CREWS, SJ
    [J]. JOURNAL OF MEDICAL GENETICS, 1984, 21 (06) : 417 - 420
  • [5] Canziani A, 2016, ARXIV PREPRINT ARXIV
  • [6] Vitelliform dystrophies: Prevalence in Olmsted County, Minnesota, United States
    Dalvin, Lauren A.
    Pulido, Jose S.
    Marmorstein, Alan D.
    [J]. OPHTHALMIC GENETICS, 2017, 38 (02) : 143 - 147
  • [7] Quantitative Fundus Autofluorescence and Optical Coherence Tomography in Best Vitelliform Macular Dystrophy
    Duncker, Tobias
    Greenberg, Jonathan P.
    Ramachandran, Rithambara
    Hood, Donald C.
    Smith, R. Theodore
    Hirose, Tatsuo
    Woods, Russell L.
    Tsang, Stephen H.
    Delori, Francois C.
    Sparrow, Janet R.
    [J]. INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2014, 55 (03) : 1471 - 1482
  • [8] Prediction of Causative Genes in Inherited Retinal Disorders from Spectral-Domain Optical Coherence Tomography Utilizing Deep Learning Techniques
    Fujinami-Yokokawa, Yu
    Pontikos, Nikolas
    Yang, Lizhu
    Tsunoda, Kazushige
    Yoshitake, Kazutoshi
    Iwata, Takeshi
    Miyata, Hiroaki
    Fujinami, Kaoru
    [J]. JOURNAL OF OPHTHALMOLOGY, 2019, 2019
  • [9] Gass J.D., 1997, INHERITED MACULAR DI, V1, P98
  • [10] Retinitis pigmentosa
    Hamel, Christian
    [J]. ORPHANET JOURNAL OF RARE DISEASES, 2006, 1 (1)