Backbone 1H, 13C and 15N resonance assignments of dengue virus NS2B-NS3p in complex with aprotinin

被引:9
|
作者
Bi, Yunchen [1 ]
Zhu, Lei [1 ]
Li, Hua [2 ]
Wu, Bo [1 ]
Liu, Jinsong [2 ]
Wang, Junfeng [1 ,3 ]
机构
[1] Chinese Acad Sci, High Field Magnet Lab, Hefei Inst Phys Sci, Hefei 230031, Anhui, Peoples R China
[2] Chinese Acad Sci, Guangzhou Inst Biomed & Hlth, Guangzhou 510530, Guangdong, Peoples R China
[3] Chinese Acad Sci, Hefei Inst Phys Sci, Ctr Med Phys & Technol, Hefei 230031, Anhui, Peoples R China
关键词
Dengue virus; Complex; NS2B-NS3p; Inhibitor; Assignment; NMR; CHEMICAL-SHIFT; LARGE PROTEINS; NMR STRUCTURES; TROSY; NS2B; NS3;
D O I
10.1007/s12104-012-9395-9
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Dengue virus, belongs to Flaviviridae, is an arthropod transmitted virus that threatens millions of people's lives. As with other flaviviruses, a positive single-stranded 11-kilobases RNA in the dengue virus genome encodes three structural proteins (capsid protein C, membrane protein M, and envelope protein E) and seven non-structural proteins (NS1, NS2A, NS2B, NS3, NS4A, NS4B, and NS5). The two component protease NS2B-NS3p is essential for viral replication and is believed to be a potential antiviral drug target. Aprotinin, a native inhibitor, is proved to retard the activity of NS2B-NS3p. The backbone assignments of NS2B-NS3p will be essential for determining the high resolution solution structure of NS2B-NS3p and screening new antiviral drugs. Herein, we report the backbone H-1, N-15, C-13 resonance assignments of the N terminal fragment of NS2B (4.8 kDa) and NS3p (18.5 kDa) in complex with aprotinin (6.5 kDa) by high resolution NMR.
引用
收藏
页码:137 / 139
页数:3
相关论文
共 50 条
  • [31] 1H, 13C and 15N resonance assignments of human parvulin 17
    Lin, Yi-Jan
    Schmidt, Andreas
    Burgardt, Noelia Ines
    Thiele, Alexandra
    Weiwad, Matthias
    Luecke, Christian
    BIOMOLECULAR NMR ASSIGNMENTS, 2013, 7 (02) : 325 - 329
  • [32] 1H, 13C and 15N backbone and side chain resonance assignments of human halo S100A1
    Gupta, Arun A.
    Mohan, Sepuru K.
    Chin, Yu
    BIOMOLECULAR NMR ASSIGNMENTS, 2012, 6 (02) : 213 - 215
  • [33] 1H, 13C, and 15N backbone resonance assignments of the porcine pepsin and porcine pepsin complexed with pepstatin
    Horimoto, Yasumi
    Wang, Shenlin
    Yada, Rickey Y.
    BIOMOLECULAR NMR ASSIGNMENTS, 2014, 8 (01) : 57 - 61
  • [34] Backbone 1H, 15N and 13C resonance assignments of the 27kDa fluorescent protein mCherry
    Sette, Marco
    Johnson, Laura Anne
    Jimenez, Ralph
    Mulder, Frans A. A.
    BIOMOLECULAR NMR ASSIGNMENTS, 2023, 17 (02) : 243 - 247
  • [35] Backbone 1H, 13C, and 15N chemical shift assignments for human SERF2
    Bikash R. Sahoo
    Vivekanandan Subramanian
    James C.A. Bardwell
    Biomolecular NMR Assignments, 2024, 18 : 51 - 57
  • [36] Backbone 1H, 13C, and 15N chemical shift assignments for human SERF2
    Sahoo, Bikash R.
    Subramanian, Vivekanandan
    Bardwell, James C. A.
    BIOMOLECULAR NMR ASSIGNMENTS, 2024, 18 (01) : 51 - 57
  • [37] Backbone 1H, 15N and 13C resonance assignments of the 27kDa fluorescent protein mCherry
    Marco Sette
    Laura Anne Johnson
    Ralph Jimenez
    Frans A.A. Mulder
    Biomolecular NMR Assignments, 2023, 17 : 243 - 247
  • [38] Backbone and sidechain 1H, 13C and 15N resonance assignments of the RGS domain from human RGS14
    Elizabeth F. Dowler
    Annette Diehl
    Peter Schmieder
    Christoph Brockmann
    Jonathan Elkins
    Meera Soundararajan
    Hartmut Oschkinat
    Linda J. Ball
    Biomolecular NMR Assignments, 2007, 1 : 95 - 97
  • [39] Backbone and sidechain 1H, 13C and 15N resonance assignments of the RGS domain from human RGS14
    Dowler, Elizabeth F.
    Diehl, Annette
    Schmieder, Peter
    Brockmann, Christoph
    Elkins, Jonathan
    Soundararajan, Meera
    Oschkinat, Hartmut
    Ball, Linda J.
    BIOMOLECULAR NMR ASSIGNMENTS, 2007, 1 (01) : 95 - 97
  • [40] 1H, 13C and 15N resonance assignments for Binder of Arl2, BART
    Bailey, Laura K.
    Campbell, Louise J.
    Evetts, Katrina A.
    Littlefield, Keily
    Rajendra, Eeson
    Nietlispach, Daniel
    Owen, Darerca
    Mott, Helen R.
    BIOMOLECULAR NMR ASSIGNMENTS, 2009, 3 (01) : 33 - 36