Ecology and genomics of Bacillus subtilis

被引：379

作者：

Earl, Ashlee M. ^{[1
]}

Losick, Richard ^{[2
]}

Kolter, Roberto ^{[1
]}

机构：

[1] Harvard Univ, Sch Med, Dept Microbiol & Mol Genet, Boston, MA 02115 USA

[2] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA

来源：

TRENDS IN MICROBIOLOGY | 2008年 / 16卷 / 06期

关键词：

D O I：

10.1016/j.tim.2008.03.004

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

Bacillus subtilis is a remarkably diverse bacterial species that is capable of growth within many environments. Recent microarray-based comparative genomic analyses have revealed that members of this species also exhibit considerable genomic diversity. The identification of strain-specific genes might explain how B. subtilis has become so broadly adapted. The goal of identifying ecologically adaptive genes could soon be realized with the imminent release of several new B. subtilis genome sequences. As we embark upon this exciting new era of B. subtilis comparative genomics we review what is currently known about the ecology and evolution of this species.

引用

页码：269 / 275

页数：7

共 79 条

[71] Specificity and genetic polymorphism of the Bacillus competence quorum-sensing system [J].

Tortosa, P ;

Logsdon, L ;

Kraigher, B ;

Itoh, Y ;

Mandic-Mulec, I ;

Dubnau, D .

JOURNAL OF BACTERIOLOGY, 2001, 183 (02) :451-460

[72] Divergent structure of the ComQXPA quorum-sensing components:: molecular basis of strain-specific communication mechanism in Bacillus subtilis [J].

Tran, LSP ;

Nagai, T ;

Itoh, Y .

MOLECULAR MICROBIOLOGY, 2000, 37 (05) :1159-1171

[73] Global Genetic Population Structure of Bacillus anthracis [J].

Van Ert, Matthew N. ;

Easterday, W. Ryan ;

Huynh, Lynn Y. ;

Okinaka, Richard T. ;

Hugh-Jones, Martin E. ;

Ravel, Jacques ;

Zanecki, Shaylan R. ;

Pearson, Talima ;

Simonson, Tatum S. ;

U'Ren, Jana M. ;

Kachur, Sergey M. ;

Leadem-Dougherty, Rebecca R. ;

Rhoton, Shane D. ;

Zinser, Guenevier ;

Farlow, Jason ;

Coker, Pamala R. ;

Smith, Kimothy L. ;

Wang, Bingxiang ;

Kenefic, Leo J. ;

Fraser-Liggett, Claire M. ;

Wagner, David M. ;

Keim, Paul .

PLOS ONE, 2007, 2 (05)

[74] The complete genome sequence of Bacillus licheniformis DSM13, an organism with great industrial potential [J].

Veith, B ;

Herzberg, C ;

Steckel, S ;

Feesche, J ;

Maurer, KH ;

Ehrenreich, P ;

Bäumer, S ;

Henne, A ;

Liesegang, H ;

Merkl, R ;

Ehrenreich, A ;

Gottschalk, G .

JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY, 2004, 7 (04) :204-211

[75] Analysis of the life cycle of the soil saprophyte Bacillus cereus in liquid soil extract and in soil [J].

Vilain, Sebastien ;

Luo, Yun ;

Hildreth, Michael B. ;

Brozel, Volker S. .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (07) :4970-4977

[76] REPORT OF THE AD-HOC-COMMITTEE ON RECONCILIATION OF APPROACHES TO BACTERIAL SYSTEMATICS [J].

WAYNE, LG ;

BRENNER, DJ ;

COLWELL, RR ;

GRIMONT, PAD ;

KANDLER, O ;

KRICHEVSKY, MI ;

MOORE, LH ;

MOORE, WEC ;

MURRAY, RGE ;

STACKEBRANDT, E ;

STARR, MP ;

TRUPER, HG .

INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1987, 37 (04) :463-464

[77] Are viruses driving microbial diversification and diversity? [J].

Weinbauer, MG ;

Rassoulzadegan, F .

ENVIRONMENTAL MICROBIOLOGY, 2004, 6 (01) :1-11

[78] Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli [J].

Welch, RA ;

Burland, V ;

Plunkett, G ;

Redford, P ;

Roesch, P ;

Rasko, D ;

Buckles, EL ;

Liou, SR ;

Boutin, A ;

Hackett, J ;

Stroud, D ;

Mayhew, GF ;

Rose, DJ ;

Zhou, S ;

Schwartz, DC ;

Perna, NT ;

Mobley, HLT ;

Donnenberg, MS ;

Blattner, FR .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (26) :17020-17024

[79] Homology among nearly all plasmids infecting three Bacillus species [J].

Zawadzki, P ;

Riley, MA ;

Cohan, FM .

JOURNAL OF BACTERIOLOGY, 1996, 178 (01) :191-198

← 1 2 3 4 5 6 7 8 →