DNA Origami Compliant Nanostructures with Tunable Mechanical Properties

被引:100
作者
Zhou, Lifeng [1 ]
Marras, Alexander E. [1 ]
Su, Hai-Jun [1 ]
Castro, Carlos E. [1 ]
机构
[1] Ohio State Univ, Dept Mech & Aerosp Engn, Columbus, OH 43210 USA
基金
美国国家科学基金会;
关键词
DNA origami; nanotechnology; compliant mechanisms; mechanical modeling; self-assembly; SINGLE-STRANDED-DNA; PERSISTENCE LENGTH; CONFORMATIONAL STATISTICS; NANOSCALE SHAPES; FOLDING DNA; MOLECULES; CHAINS; SPECTROSCOPY; FLEXIBILITY; PREDICTION;
D O I
10.1021/nn405408g
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
DNA origami enables fabrication of precise nanostructures by programming the self-assembly of DNA. While this approach has been used to make a variety of complex 2D and 3D objects, the mechanical functionality of these structures is limited due to their rigid nature. We explore the fabrication of deformable, or compliant, objects to establish a framework for mechanically functional nanostructures. This compliant design approach is used in macroscopic engineering to make devices including sensors, actuators, and robots. We build compliant nanostructures by utilizing the entropic elasticity of single-stranded DNA (ssDNA) to locally bend bundles of double-stranded DNA into bent geometries whose curvature and mechanical properties can be tuned by controlling the length of ssDNA strands. We demonstrate an ability to achieve a wide range of geometries by adjusting a few strands in the nanostructure design. We further developed a mechanical model to predict both geometry and mechanical properties of our compliant nanostructures that agrees well with experiments. Our results provide a basis for the design of mechanically functional DNA origami devices and materials.
引用
收藏
页码:27 / 34
页数:8
相关论文
共 54 条
[1]   DNA nanomachines [J].
Bath, Jonathan ;
Turberfield, Andrew J. .
NATURE NANOTECHNOLOGY, 2007, 2 (05) :275-284
[2]   Ionic effects on the elasticity of single DNA molecules [J].
Baumann, CG ;
Smith, SB ;
Bloomfield, VA ;
Bustamante, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (12) :6185-6190
[3]  
Beer F.P., 2001, MECH MATER, V3rd, P670
[4]   Direct observation of dendritic actin filament networks nucleated by Arp2/3 complex and WASP/Scar proteins [J].
Blanchoin, L ;
Amann, KJ ;
Higgs, HN ;
Marchand, JB ;
Kaiser, DA ;
Pollard, TD .
NATURE, 2000, 404 (6781) :1007-1011
[5]   Single-molecule studies of DNA mechanics [J].
Bustamante, C ;
Smith, SB ;
Liphardt, J ;
Smith, D .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 2000, 10 (03) :279-285
[6]  
Castro CE, 2011, NAT METHODS, V8, P221, DOI [10.1038/nmeth.1570, 10.1038/NMETH.1570]
[7]   The persistence length and length per base of single-stranded DNA obtained from fluorescence correlation spectroscopy measurements using mean field theory [J].
Chi, Qingjia ;
Wang, Guixue ;
Jiang, Jiahuan .
PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2013, 392 (05) :1072-1079
[8]   Principal-components analysis of shape fluctuations of single DNA molecules [J].
Cohen, Adam E. ;
Moerner, W. E. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (31) :12622-12627
[9]   Simulations of single grafted polyelectrolyte chains: ssDNA and dsDNA [J].
Crozier, PS ;
Stevens, MJ .
JOURNAL OF CHEMICAL PHYSICS, 2003, 118 (08) :3855-3860
[10]   Simulation of a carbon nanotube-based compliant parallel-guiding mechanism: A nanomechanical building block [J].
Culpepper, Martin L. ;
DiBiasio, Christopher M. ;
Panas, Robert M. ;
Magleby, Spencer ;
Howell, Larry L. .
APPLIED PHYSICS LETTERS, 2006, 89 (20)