Identification of novel single nucleotide polymorphisms (SNPs) of the lipoprotein lipase (LPL) gene associated with fatty acid composition in Korean cattle

被引:22
作者
Oh, Dongyep [1 ]
La, Boomi [1 ]
Lee, Yoonseok [2 ]
Byun, Younhwa [1 ]
Lee, Jeayoung [3 ]
Yeo, Geunhye [4 ]
Yeo, Jungsou [1 ]
机构
[1] Yeungnam Univ, Sch Biotechnol, Gyongsan 712749, Gyeongbuk, South Korea
[2] Inst Charmpoom Hanwoo, Gyongsan 712210, Gyeongbuk, South Korea
[3] Yeungnam Univ, Dept Stat, Gyongsan 712749, Gyeongbuk, South Korea
[4] Green Cross Res Ctr, Yongin 446770, South Korea
关键词
Lipoprotein lipase; Korean cattle; Unsaturated fatty acid; Beef flavor; ADIPOSE-TISSUE; JAPANESE; LIPIDS; PALATABILITY; STEERS; BEEF; MEAT;
D O I
10.1007/s11033-012-2389-y
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The lipoprotein lipase (LPL) gene can be considered a functional candidate gene that regulates fatty acid composition. In this study, genetic associations between fatty acid composition and exonic single nucleotide polymorphisms (SNPs) in the LPL gene were examined using 612 Korean cattle. We investigated the relationship between unsaturated fatty acids and five novel SNPs (c.322G > A, c.329A > T, c.527T > G, c.988C > T and c.1591G > A), and confirmed that three polymorphic SNPs (c.322G > A, c.329A > T and c.1591G > A) were associated with fatty acid composition. Korean cattle with an AA genotype of c.322G > A, c.329A > T, and GA genotype of c.1591G > A had higher levels of monounsaturated fatty acids and carcass traits (P < 0.05). Our findings confirmed that three novel SNPs we identified in the LPL gene can affect fatty acid composition and carcass traits. Therefore, selection for AA and GA genotypes should be recommended to genetically improve beef quality and flavor.
引用
收藏
页码:3155 / 3163
页数:9
相关论文
共 28 条
[1]   Quantitative trait loci with additive effects on palatability and fatty acid composition of meat in a Wagyu-Limousin F2 population [J].
Alexander, L. J. ;
MacNeil, M. D. ;
Geary, T. W. ;
Snelling, W. M. ;
Rule, D. C. ;
Scanga, J. A. .
ANIMAL GENETICS, 2007, 38 (05) :506-513
[2]   Lipid characteristics of subcutaneous adipose tissue and M-longissimus thoracis of Angus and Wagyu steers fed to US and Japanese endpoints [J].
Chung, K. Y. ;
Lunt, D. K. ;
Choi, C. B. ;
Chae, S. H. ;
Rhoades, R. D. ;
Adams, T. H. ;
Booren, B. ;
Smith, S. B. .
MEAT SCIENCE, 2006, 73 (03) :432-441
[3]   A novel single nucleotide polymorphism in exon 7 of LPL gene and its association with carcass traits and visceral fat deposition in yak (Bos grunniens) steers [J].
Ding, X. Z. ;
Liang, C. N. ;
Guo, X. ;
Xing, C. F. ;
Bao, P. J. ;
Chu, M. ;
Pei, J. ;
Zhu, X. S. ;
Yan, P. .
MOLECULAR BIOLOGY REPORTS, 2012, 39 (01) :669-673
[4]   INFLUENCE OF TOTAL LIPID AND FATTY ACID COMPOSITION UPON PALATABILITY OF 3 BOVINE MUSCLES [J].
DRYDEN, FD ;
MARCHELLO, JA .
JOURNAL OF ANIMAL SCIENCE, 1970, 31 (01) :36-+
[5]   Allele frequency matching between SNPs reveals an excess of linkage disequilibrium in genic regions of the human genome [J].
Eberle, Michael A. ;
Rieder, Mark J. ;
Kruglyak, Leonid ;
Nickerson, Deborah A. .
PLOS GENETICS, 2006, 2 (09) :1319-1327
[6]  
FOLCH J, 1957, J BIOL CHEM, V226, P497
[7]   Chylomicronemia mutations yield new insights into interactions between lipoprotein lipase and GPIHBP1 [J].
Gin, Peter ;
Goulbourne, Chris N. ;
Adeyo, Oludotun ;
Beigneux, Anne P. ;
Davies, Brandon S. J. ;
Tat, Shelly ;
Voss, Constance V. ;
Bensadoun, Andre ;
Fong, Loren G. ;
Young, Stephen G. .
HUMAN MOLECULAR GENETICS, 2012, 21 (13) :2961-2972
[8]   Association between fatty acid compositions and genotypes of FABP4 and LXR-alpha in Japanese Black cattle [J].
Hoashi, Shogo ;
Hinenoya, Tomoko ;
Tanaka, Atsuko ;
Ohsaki, Hideki ;
Sasazaki, Shinji ;
Taniguchi, Masaaki ;
Oyama, Kenji ;
Mukai, Fumio ;
Mannen, Hideyuki .
BMC GENETICS, 2008, 9 (1)
[9]   Influence of dietary addition of dried wormwood (Artemisia sp.) on the performance and carcass characteristics of Hanwoo steers and the nutrient digestibility of sheep [J].
Kim, JH ;
Kim, CH ;
Ko, YD .
ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES, 2002, 15 (03) :390-395
[10]   Molecular modeling of the dimeric structure of human lipoprotein lipase and functional studies of the carboxyl-terminal domain [J].
Kobayashi, Y ;
Nakajima, T ;
Inoue, I .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2002, 269 (18) :4701-4710