Dependence of DNA Persistence Length on Ionic Strength and Ion Type

被引:73
作者
Guilbaud, Sebastien [1 ,3 ]
Salome, Laurence [1 ]
Destainville, Nicolas [2 ]
Manghi, Manoel [2 ]
Tardin, Catherine [1 ]
机构
[1] Univ Toulouse, Inst Phannacol & Biol Struct, UPS, CNRS, F-31077 Toulouse, France
[2] Univ Toulouse, Lab Phys Theor IRSAMC, UPS, CNRS, F-31062 Toulouse, France
[3] Univ York, Dept Phys, York YO10 5DD, N Yorkshire, England
关键词
ELASTICITY; ACID; SALT; NANOSTRUCTURES; CONFORMATION; FLEXIBILITY; MONOVALENT; DYNAMICS; CHARGE; LIGHT;
D O I
10.1103/PhysRevLett.122.028102
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
Even though the persistence length L-P of double-stranded DNA plays a pivotal role in cell biology and nanotechnologies, its dependence on ionic strength I lacks a consensual description. Using a high-throughput single-molecule technique and statistical physics modeling, we measure L-P in the presence of monovalent (Li+, Na+, K+) and divalent (Mg2+, Ca2+) metallic and alkyl ammonium ions, over a large range 0.5 mM <= I <= 5 M. We show that linear Debye-Huckel-type theories do not describe even part of these data. By contrast, the Netz-Orland and Trizac-Shen formulas, two approximate theories including nonlinear electrostatic effects and the finite DNA radius, fit our data with divalent and monovalent ions, respectively, over the whole I range. Furthermore, the metallic ion type does not influence L-P(I), in contrast to alkyl ammonium monovalent ions at high I.
引用
收藏
页数:6
相关论文
共 50 条
[1]  
Alberts B., 2002, Molecular Biology of the Cell, V4
[2]   Effective charge versus bare charge: an analytical estimate for colloids in the infinite dilution limit [J].
Aubouy, M ;
Trizac, E ;
Bocquet, L .
JOURNAL OF PHYSICS A-MATHEMATICAL AND GENERAL, 2003, 36 (22) :5835-5840
[3]   PERSISTENCE LENGTH OF POLYELECTROLYTE CHAINS [J].
BARRAT, JL ;
JOANNY, JF .
EUROPHYSICS LETTERS, 1993, 24 (05) :333-338
[4]  
Barthel J.M.G., 1998, Physical Chemistry of Electrolyte Solutions: Modern Aspects, V5th
[5]   Ionic effects on the elasticity of single DNA molecules [J].
Baumann, CG ;
Smith, SB ;
Bloomfield, VA ;
Bustamante, C .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (12) :6185-6190
[6]   Electrostatic Effects on the Conformation and Elasticity of Hyaluronic Acid, a Moderately Flexible Polyelectrolyte [J].
Berezney, John P. ;
Saleh, Omar A. .
MACROMOLECULES, 2017, 50 (03) :1085-1089
[7]  
Bevington P. R., 2003, DATA REDUCTION ERROR, DOI DOI 10.1063/1.4823194
[8]   Aqueous solutions of tetraalkylammonium halides: ion hydration, dynamics and ion-ion interactions in light of steric effects [J].
Bhowmik, Debsindhu ;
Malikova, Natalie ;
Meriguet, Guillaume ;
Bernard, Olivier ;
Teixeira, Jose ;
Turq, Pierre .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2014, 16 (26) :13447-13457
[9]   Three-dimensional characterization of tethered microspheres by total internal reflection fluorescence microscopy [J].
Blumberg, S ;
Gajraj, A ;
Pennington, MW ;
Meiners, JC .
BIOPHYSICAL JOURNAL, 2005, 89 (02) :1272-1281
[10]   How does temperature impact the conformation of single DNA molecules below melting temperature? [J].
Brunet, Annael ;
Salome, Laurence ;
Rousseau, Philippe ;
Destainville, Nicolas ;
Manghi, Manoel ;
Tardin, Catherine .
NUCLEIC ACIDS RESEARCH, 2018, 46 (04) :2074-2081