The clinical utility of microarray technologies applied to prenatal cytogenetics in the presence of a normal conventional karyotype: a review of the literature

被引:150
作者
Callaway, Jonathan L. A. [1 ]
Shaffer, Lisa G. [3 ]
Chitty, Lyn S. [4 ,5 ,6 ]
Rosenfeld, Jill A. [7 ]
Crolla, John A. [1 ,2 ]
机构
[1] Salisbury Dist Hosp, Wessex Reg Genet Lab, Salisbury, Wilts, England
[2] Univ Southampton, Fac Med, Dept Human Genet & Genom Med, Southampton Gen Hosp, Southampton SO9 5NH, Hants, England
[3] Genet Vet Sci Inc, Paw Print Genet, Spokane, WA USA
[4] UCL Inst Child Hlth, Clin & Mol Genet Unit, London, England
[5] Great Ormond St NHS Fdn Trust, London, England
[6] Univ Coll London Hosp NHS Fdn Trust, London, England
[7] PerkinElmer Inc, Signature Genom Labs, Spokane, WA USA
基金
英国医学研究理事会;
关键词
COMPARATIVE GENOMIC HYBRIDIZATION; ARRAY-CGH; CHROMOSOMAL MICROARRAY; SNP ARRAY; DIAGNOSIS; FETUSES; PREGNANCIES; IDENTIFICATION; ABNORMALITIES;
D O I
10.1002/pd.4209
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The clinical utility of microarray technologies when used in the context of prenatal diagnosis lies in the technology's ability to detect submicroscopic copy number changes that are associated with clinically significant outcomes. We have carried out a systematic review of the literature to calculate the utility of prenatal microarrays in the presence of a normal conventional karyotype. Amongst 12362 cases in studies that recruited cases from all prenatal ascertainment groups, 295/12362 (2.4%) overall were reported to have copy number changes with associated clinical significance (pCNC), 201/3090 (6.5%) when ascertained with an abnormal ultrasound, 50/5108 (1.0%) when ascertained because of increased maternal age and 44/4164 (1.1%) for all other ascertainment groups (e.g. parental anxiety and abnormal serum screening result). When additional prenatal microarray studies are included in which ascertainment was restricted to fetuses with abnormal ultrasound scans, 262/3730 (7.0%) were reported to have pCNCs. (c) 2013 John Wiley & Sons, Ltd.
引用
收藏
页码:1119 / 1123
页数:5
相关论文
共 32 条
[1]   Clinical utility of chromosomal microarray analysis in invasive prenatal diagnosis [J].
Armengol, Lluis ;
Nevado, Julian ;
Serra-Juhe, Clara ;
Plaja, Alberto ;
Mediano, Carmen ;
Amalia Garcia-Santiago, Fe ;
Garcia-Aragones, Manel ;
Villa, Olaya ;
Mansilla, Elena ;
Preciado, Cristina ;
Fernandez, Luis ;
Angeles Mori, Maria ;
Garcia-Perez, Lidia ;
Daniel Lapunzina, Pablo ;
Alberto Perez-Jurado, Luis .
HUMAN GENETICS, 2012, 131 (03) :513-523
[2]   Prenatal chromosomal microarray analysis in a diagnostic laboratory; experience with >1000 cases and review of the literature [J].
Breman, Amy ;
Pursley, Amber N. ;
Hixson, Patricia ;
Bi, Weimin ;
Ward, Patricia ;
Bacino, Carlos A. ;
Shaw, Chad ;
Lupski, James R. ;
Beaudet, Arthur ;
Patel, Ankita ;
Cheung, Sau W. ;
Van den Veyver, Ignatia .
PRENATAL DIAGNOSIS, 2012, 32 (04) :351-361
[3]   A method for noninvasive detection of fetal large deletions/duplications by low coverage massively parallel sequencing [J].
Chen, Shengpei ;
Lau, Tze Kin ;
Zhang, Chunlei ;
Xu, Chenming ;
Xu, Zhengfeng ;
Hu, Ping ;
Xu, Jian ;
Huang, Hefeng ;
Pan, Ling ;
Jiang, Fuman ;
Chen, Fang ;
Pan, Xiaoyu ;
Xie, Weiwei ;
Liu, Ping ;
Li, Xuchao ;
Zhang, Lei ;
Li, Songgang ;
Li, Yingrui ;
Xu, Xun ;
Wang, Wei ;
Wang, Jun ;
Jiang, Hui ;
Zhang, Xiuqing .
PRENATAL DIAGNOSIS, 2013, 33 (06) :584-590
[4]   Whole-genome microarray analysis in prenatal specimens identifies clinically significant chromosome alterations without increase in results of unclear significance compared to targeted microarray [J].
Coppinger, Justine ;
Alliman, Sarah ;
Lamb, Allen N. ;
Torchia, Beth S. ;
Bejjani, Bassem A. ;
Shaffer, Lisa G. .
PRENATAL DIAGNOSIS, 2009, 29 (12) :1156-1166
[5]   Whole-genome array CGH identifies pathogenic copy number variations in fetuses with major malformations and a normal karyotype [J].
D'Amours, G. ;
Kibar, Z. ;
Mathonnet, G. ;
Fetni, R. ;
Tihy, F. ;
Desilets, V. ;
Nizard, S. ;
Michaud, J. L. ;
Lemyre, E. .
CLINICAL GENETICS, 2012, 81 (02) :128-141
[6]   Prenatal Detection of Aneuploidy and Imbalanced Chromosomal Arrangements by Massively Parallel Sequencing [J].
Dan, Shan ;
Chen, Fang ;
Choy, Kwong Wai ;
Jiang, Fuman ;
Lin, Jingrong ;
Xuan, Zhaoling ;
Wang, Wei ;
Chen, Shengpei ;
Li, Xuchao ;
Jiang, Hui ;
Leung, Tak Yeung ;
Lau, Tze Kin ;
Su, Yue ;
Zhang, Weiyuan ;
Zhang, Xiuqing .
PLOS ONE, 2012, 7 (02)
[7]   Diagnostic genome profiling in mental retardation [J].
de Vries, BBA ;
Pfundt, R ;
Leisink, M ;
Koolen, DA ;
Vissers, LELM ;
Janssen, IM ;
van Reijmersdal, S ;
Nillesen, WM ;
Huys, EHLPG ;
de Leeuw, N ;
Smeets, D ;
Sistermans, EA ;
Feuth, T ;
van Ravenswaaij-Arts, CMA ;
van Kessel, AG ;
Schoenmakers, EFPM ;
Brunner, HG ;
Veltman, JA .
AMERICAN JOURNAL OF HUMAN GENETICS, 2005, 77 (04) :606-616
[8]   Clinical application of whole-genome array CGH during prenatal diagnosis: Study of 25 selected pregnancies with abnormal ultrasound findings or apparently balanced structural aberrations [J].
Evangelidou, Paola ;
Sismani, Carolina ;
Ioannides, Marios ;
Christodoulou, Christodoulos ;
Koumbaris, George ;
Kallikas, Ioannis ;
Georgiou, Ioannis ;
Velissariou, Voula ;
Patsalis, Philippos C. .
MOLECULAR CYTOGENETICS, 2010, 3
[9]   Identification of clinically significant, submicroscopic chromosome alterations and UPD in fetuses with ultrasound anomalies using genome-wide 250k SNP array analysis [J].
Faas, B. H. W. ;
van der Burgt, I. ;
Kooper, A. J. A. ;
Pfundt, R. ;
Hehir-Kwa, J. Y. ;
Smits, A. P. T. ;
de Leeuw, N. .
JOURNAL OF MEDICAL GENETICS, 2010, 47 (09) :586-594
[10]   Array comparative genomic hybridization in prenatal diagnosis of first trimester pregnancies at high risk for chromosomal anomalies [J].
Filges, Isabel ;
Kang, Anjeung ;
Klug, Vanessa ;
Wenzel, Friedel ;
Heinimann, Karl ;
Tercanli, Sevgi ;
Miny, Peter .
MOLECULAR CYTOGENETICS, 2012, 5