Mining of camel rumen metagenome to identify novel alkali-thermostable xylanase capable of enhancing the recalcitrant lignocellulosic biomass conversion

被引:37
作者
Ariaeenejad, Shohreh [1 ]
Maleki, Morteza [1 ]
Hosseini, Elnaz [2 ]
Kavousi, Kaveh [2 ]
Moosavi-Movahedi, Ali A. [2 ]
Salekdeh, Ghasem Hosseini [1 ]
机构
[1] Agr Res Educ & Extens Org AREO, Dept Syst Biol, ABRII, Karaj, Iran
[2] Univ Tehran, IBB, Tehran, Iran
基金
美国国家科学基金会;
关键词
Alkaline thermostable xylanase; Metagenome; Camel rumen; Recalcitrant compounds; BACTERIAL COMMUNITY; IDENTIFICATION; GENE; PURIFICATION; GENOMES; CLONING;
D O I
10.1016/j.biortech.2019.02.059
中图分类号
S2 [农业工程];
学科分类号
0828 ;
摘要
The aim of this study was to isolate and characterize novel alkali-thermostable xylanase genes from the mixed genome DNA of camel rumen metagenome. In this study, a five-stage computational screening procedure was utilized to find the primary candidate enzyme with superior properties from the camel rumen metagenome. This enzyme was subjected to cloning, purification, and structural and functional characterization. It showed high thermal stability, high activity in a broad range of pH (6-11) and temperature (30-90 degrees C) and effectivity in recalcitrant lignocellulosic biomass degradation. Our results demonstrated the power of in silico analysis to discover novel alkali-thermostable xylanases, effective for the bioconversion of lignocellulosic biomass.
引用
收藏
页码:343 / 350
页数:8
相关论文
共 50 条
[1]   INTERLABORATORY TESTING OF METHODS FOR ASSAY OF XYLANASE ACTIVITY [J].
BAILEY, MJ ;
BIELY, P ;
POUTANEN, K .
JOURNAL OF BIOTECHNOLOGY, 1992, 23 (03) :257-270
[2]   Thermal stability of lysozyme and myoglobin in the presence of anionic surfactants [J].
Blanco, Elena ;
Ruso, J. M. ;
Sabin, J. ;
Prieto, G. ;
Sarmiento, F. .
JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY, 2007, 87 (01) :211-215
[3]   Metagenomic analysis and functional characterization of the biogas microbiome using high throughput shotgun sequencing and a novel binning strategy [J].
Campanaro, Stefano ;
Treu, Laura ;
Kougias, Panagiotis G. ;
De Francisci, Davide ;
Valle, Giorgio ;
Angelidaki, Irini .
BIOTECHNOLOGY FOR BIOFUELS, 2016, 9
[4]   A single domain thermophilic xylanase can bind insoluble xylan: evidence for surface aromatic clusters [J].
Connerton, I ;
Cummings, N ;
Harris, GW ;
Debeire, P ;
Breton, C .
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEIN STRUCTURE AND MOLECULAR ENZYMOLOGY, 1999, 1433 (1-2) :110-121
[5]  
Devi S, 2017, OPEN AGRIC, V2, P486, DOI 10.1515/opag-2017-0053
[6]  
Dhiman SS, 2008, BIORESOURCES, V3, P1377
[7]   Immobilization of Penaeus vannamei protease on ZnO nanoparticles for long-term use [J].
Diyanat, Somayeh ;
Homaei, Ahmad ;
Mosaddegh, Elaheh .
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2018, 118 :92-98
[8]  
Ellis J.T., 2012, ISRN MICROBIOL
[9]   ISL1 Protein Transduction Promotes Cardiomyocyte Differentiation from Human Embryonic Stem Cells [J].
Fonoudi, Hananeh ;
Yeganeh, Meghdad ;
Fattahi, Faranak ;
Ghazizadeh, Zaniar ;
Rassouli, Hassan ;
Alikhani, Mehdi ;
Mojarad, Bahareh Adhami ;
Baharvand, Hossein ;
Salekdeh, Ghasem Hosseini ;
Aghdami, Nasser .
PLOS ONE, 2013, 8 (01)
[10]   Xylanase- and cellulose-aided bioprocessing of bamboo [J].
Fu, Jiajia ;
Fu, Lina ;
Zhao, Xiaoman ;
Zhang, Qun ;
Wang, Hongbo ;
Gao, Weidong .
ENGINEERING IN LIFE SCIENCES, 2015, 15 (06) :605-611