Human-level recognition of blast cells in acute myeloid leukaemia with convolutional neural networks

被引:145
作者
Matek, Christian [1 ,2 ]
Schwarz, Simone [2 ]
Spiekermann, Karsten [2 ,3 ,4 ]
Marr, Carsten [1 ]
机构
[1] German Res Ctr Environm Hlth, Helmholtz Zentrum Munchen, Inst Computat Biol, Neuherberg, Germany
[2] Ludwig Maximilians Univ Munchen, Univ Hosp, Dept Med 3, Lab Leukemia Diagnost, Munich, Germany
[3] German Canc Consortium DKTK, Heidelberg, Germany
[4] German Canc Res Ctr, Heidelberg, Germany
关键词
MYELODYSPLASTIC SYNDROMES; INTEROBSERVER VARIANCE; CLASSIFICATION; DIAGNOSIS; CANCER; IMAGES;
D O I
10.1038/s42256-019-0101-9
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Reliable recognition of malignant white blood cells is a key step in the diagnosis of haematologic malignancies such as acute myeloid leukaemia. Microscopic morphological examination of blood cells is usually performed by trained human examiners, making the process tedious, time-consuming and hard to standardize. Here, we compile an annotated image dataset of over 18,000 white blood cells, use it to train a convolutional neural network for leukocyte classification and evaluate the network's performance by comparing to inter- and intra-expert variability. The network classifies the most important cell types with high accuracy. It also allows us to decide two clinically relevant questions with human-level performance: (1) if a given cell has blast character and (2) if it belongs to the cell types normally present in non-pathological blood smears. Our approach holds the potential to be used as a classification aid for examining much larger numbers of cells in a smear than can usually be done by a human expert. This will allow clinicians to recognize malignant cell populations with lower prevalence at an earlier stage of the disease. Deep learning is currently transforming digital pathology, helping to make more reliable and faster clinical diagnoses. A promising application is in the recognition of malignant white blood cells-an essential step for detecting acute myeloid leukaemia that is challenging even for trained human examiners. An annotated image dataset of over 18,000 white blood cells is compiled and used to train a convolutional neural network for leukocyte classification. The network classifies the most important cell types with high accuracy and can answer clinically relevant binary questions with human-level performance.
引用
收藏
页码:538 / 544
页数:7
相关论文
共 44 条
[1]   AggNet: Deep Learning From Crowds for Mitosis Detection in Breast Cancer Histology Images [J].
Albarqouni, Shadi ;
Baur, Christoph ;
Achilles, Felix ;
Belagiannis, Vasileios ;
Demirci, Stefanie ;
Navab, Nassir .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2016, 35 (05) :1313-1321
[2]   Automatic Detection and Quantification of WBCs and RBCs Using Iterative Structured Circle Detection Algorithm [J].
Alomari, Yazan M. ;
Abdullah, Siti Norul Huda Sheikh ;
Azma, Raja Zaharatul ;
Omar, Khairuddin .
COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE, 2014, 2014
[3]  
[Anonymous], **DATA OBJECT**, DOI DOI 10.7937/TCIA.2019.36F5O9LD
[4]  
[Anonymous], 2016, DEEP LEARNING
[5]  
[Anonymous], 2017, WHO CLASSIFICATION T
[6]   The 2016 revision to the World Health Organization classification of myeloid neoplasms and acute leukemia [J].
Arber, Daniel A. ;
Orazi, Attilio ;
Hasserjian, Robert ;
Thiele, Jurgen ;
Borowitz, Michael J. ;
Le Beau, Michelle M. ;
Bloomfield, Clara D. ;
Cazzola, Mario ;
Vardiman, James W. .
BLOOD, 2016, 127 (20) :2391-2405
[7]   Current concepts: Diagnosis from the blood smear [J].
Bain, BJ .
NEW ENGLAND JOURNAL OF MEDICINE, 2005, 353 (05) :498-507
[8]   PROPOSED REVISED CRITERIA FOR THE CLASSIFICATION OF ACUTE MYELOID-LEUKEMIA - A REPORT OF THE FRENCH-AMERICAN-BRITISH COOPERATIVE GROUP [J].
BENNETT, JM ;
CATOVSKY, D ;
DANIEL, MT ;
FLANDRIN, G ;
GALTON, DAG ;
GRALNICK, HR ;
SULTAN, C .
ANNALS OF INTERNAL MEDICINE, 1985, 103 (04) :620-625
[9]   Feature Analysis and Automatic Identification of Leukemic Lineage Blast Cells and Reactive Lymphoid Cells from Peripheral Blood Cell Images [J].
Bigorra, Laura ;
Merino, Anna ;
Alferez, Santiago ;
Rodellar, Jose .
JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2017, 31 (02)
[10]   Deep learning based tissue analysis predicts outcome in colorectal cancer [J].
Bychkov, Dmitrii ;
Linder, Nina ;
Turkki, Riku ;
Nordling, Stig ;
Kovanen, Panu E. ;
Verrill, Clare ;
Walliander, Margarita ;
Lundin, Mikael ;
Haglund, Caj ;
Lundin, Johan .
SCIENTIFIC REPORTS, 2018, 8