Warming drives ecological community changes linked to host-associated microbiome dysbiosis

被引:62
作者
Greenspan, Sasha E. [1 ]
Migliorini, Gustavo H. [2 ]
Lyra, Mariana L. [3 ,4 ]
Pontes, Mariana R. [5 ,6 ]
Carvalho, Tamilie [5 ,6 ]
Ribeiro, Luisa P. [5 ,6 ]
Moura-Campos, Diego [5 ,6 ]
Haddad, Celio F. B. [3 ,4 ]
Toledo, Luis Felipe [5 ]
Romero, Gustavo Q. [7 ]
Becker, C. Guilherme [1 ]
机构
[1] Univ Alabama, Dept Biol Sci, Tuscaloosa, AL USA
[2] Univ Estadual Paulista, Programa Posgrad Biol Anim, Sao Jose Do Rio Preto, Brazil
[3] Univ Estadual Paulista, Dept Biodivers, Rio Claro, Brazil
[4] Univ Estadual Paulista, Aquaculture Ctr CAUNESP, Rio Claro, Brazil
[5] Univ Estadual Campinas, Dept Biol Anim, Lab Hist Nat Anfibios Brasileiros LaHNAB, Campinas, Brazil
[6] Univ Estadual Campinas, Inst Biol, Programa Posgrad Ecol, Campinas, Brazil
[7] Univ Estadual Campinas, Dept Biol Anim, Campinas, Brazil
基金
巴西圣保罗研究基金会;
关键词
INFECTIOUS-DISEASES; BETA-DIVERSITY; TEMPERATURE; CONSERVATION; GREENGENES; DYNAMICS; BACTERIA; WILDLIFE; UNIFRAC; IMPACT;
D O I
10.1038/s41558-020-0899-5
中图分类号
X [环境科学、安全科学];
学科分类号
08 ; 0830 ;
摘要
Replicated bromeliad microecosystems were used to examine warming-induced community shifts and changes to tadpole gut microbiome. Tadpole growth was more strongly associated with cascading effects of warming on gut dysbiosis than with direct warming effects or indirect effects on food resources. Anthropogenic climate warming affects many biological systems, ranging in scale from microbiomes to biomes. In many animals, warming-related fitness depression appears more closely linked to changes in ecological community interactions than to direct thermal stress. This biotic community framework is commonly applied to warming studies at the scale of ecosystems but is rarely applied at the scale of microbiomes. Here, we used replicated bromeliad microecosystems to show warming effects on tadpole gut microbiome dysbiosis mediated through biotic community interactions. Warming shifted environmental bacteria and arthropod community composition, with linkages to changes in microbial recruitment that promoted dysbiosis and stunted tadpole growth. Tadpole growth was more strongly associated with cascading effects of warming on gut dysbiosis than with direct warming effects or indirect effects on food resources. These results suggest that assessing warming effects on animal health requires an ecological community perspective on microbiome structure and function.
引用
收藏
页码:1057 / +
页数:11
相关论文
共 78 条
[51]   UniFrac: a new phylogenetic method for comparing microbial communities [J].
Lozupone, C ;
Knight, R .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (12) :8228-8235
[52]   UniFrac: an effective distance metric for microbial community comparison [J].
Lozupone, Catherine ;
Lladser, Manuel E. ;
Knights, Dan ;
Stombaugh, Jesse ;
Knight, Rob .
ISME JOURNAL, 2011, 5 (02) :169-172
[53]   Quantitative and qualitative β diversity measures lead to different insights into factors that structure microbial communities [J].
Lozupone, Catherine A. ;
Hamady, Micah ;
Kelley, Scott T. ;
Knight, Rob .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (05) :1576-1585
[54]   An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea [J].
McDonald, Daniel ;
Price, Morgan N. ;
Goodrich, Julia ;
Nawrocki, Eric P. ;
DeSantis, Todd Z. ;
Probst, Alexander ;
Andersen, Gary L. ;
Knight, Rob ;
Hugenholtz, Philip .
ISME JOURNAL, 2012, 6 (03) :610-618
[55]   FEEDING-BEHAVIOR, NATURAL FOOD, AND NUTRITIONAL RELATIONSHIPS OF LARVAL MOSQUITOS [J].
MERRITT, RW ;
DADD, RH ;
WALKER, ED .
ANNUAL REVIEW OF ENTOMOLOGY, 1992, 37 :349-376
[56]   Changes in cutaneous microbial abundance with sloughing: possible implications for infection and disease in amphibians [J].
Meyer, Edward A. ;
Cramp, Rebecca L. ;
Hernando Bernal, Manuel ;
Franklin, Craig E. .
DISEASES OF AQUATIC ORGANISMS, 2012, 101 (03) :235-242
[57]   Effects of Warming and Nutrient Enrichment on How Grazing Pressure Affects Leaf Litter-Colonizing Bacteria [J].
Moghadam, Fatemeh Sanaei ;
Zimmer, Martin .
JOURNAL OF ENVIRONMENTAL QUALITY, 2014, 43 (03) :851-858
[58]   Inhibition of Fungal Pathogens across Genotypes and Temperatures by Amphibian Skin Bacteria [J].
Muletz-Wolz, Carly R. ;
Almario, Jose G. ;
Barnett, Samuel E. ;
DiRenzo, Graziella V. ;
Martel, An ;
Pasmans, Frank ;
Zamudio, Kelly R. ;
Toledo, Luis Felipe ;
Lips, Karen R. .
FRONTIERS IN MICROBIOLOGY, 2017, 8
[59]   Synergistic effects of warming and disease linked to high mortality in cool-adapted terrestrial frogs [J].
Neely, Wesley J. ;
Greenspan, Sasha E. ;
Ribeiro, Luisa P. ;
Carvalho, Tamilie ;
Martins, Renato A. ;
Rodriguez, David ;
Rohr, Jason R. ;
Haddad, Celio F. B. ;
Toledo, Luis Felipe ;
Becker, C. Guilherme .
BIOLOGICAL CONSERVATION, 2020, 245
[60]   Mechanisms underpinning climatic impacts on natural populations: altered species interactions are more important than direct effects [J].
Ockendon, Nancy ;
Baker, David J. ;
Carr, Jamie A. ;
White, Elizabeth C. ;
Almond, Rosamunde E. A. ;
Amano, Tatsuya ;
Bertram, Esther ;
Bradbury, Richard B. ;
Bradley, Cassie ;
Butchart, Stuart H. M. ;
Doswald, Nathalie ;
Foden, Wendy ;
Gill, David J. C. ;
Green, Rhys E. ;
Sutherland, William J. ;
Tanner, Edmund V. J. ;
Pearce-Higgins, James W. .
GLOBAL CHANGE BIOLOGY, 2014, 20 (07) :2221-2229