Structural modification of NADPH oxidase activator (Noxa 1) by oxidative stress: An experimental and computational study

被引:22
作者
Attri, Pankaj [1 ,2 ]
Park, Jae-Hyun [3 ]
De Backer, Joey [4 ]
Kim, Myeongkyu [3 ]
Yun, Ji-Hye [3 ]
Heo, Yunseok [3 ]
Dewilde, Sylvia [4 ]
Shiratani, Masaharu [1 ]
Choi, Eun Ha [5 ]
Lee, Weontae [3 ]
Bogaerts, Annemie [2 ]
机构
[1] Kyushu Univ, Ctr Plasma Nanointerface Engn, Fukuoka, Japan
[2] Univ Antwerp, Dept Chem, Res Grp PLASMANT, Antwerp, Belgium
[3] Yonsei Univ, Coll Life Sci & Biotechnol, Dept Biochem, 134 Shinchon Dong, Seoul 120749, South Korea
[4] Univ Antwerp, Dept Biomed Sci, Res Grp PPES, Univ Pl 1, B-1610 Antwerp, Belgium
[5] Kwangwoon Univ, Dept Elect & Biol Phys, Seoul 01897, South Korea
基金
新加坡国家研究基金会; 欧盟地平线“2020”;
关键词
Noxa1; SH3; Oxidative stress; X-ray crystallography; MD simulations; MOLECULAR-DYNAMICS; PLASMA; INACTIVATION; PROTEINS; FAMILY; FOCUS;
D O I
10.1016/j.ijbiomac.2020.09.120
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
NADPH oxidases 1 (NOX1) derived reactive oxygen species (ROS) play an important role in the progression of cancer through signaling pathways. Therefore, in this paper, we demonstrate the effect of cold atmospheric plasma (CAP) on the structural changes of Noxa1 SH3 protein, one of the regulatory subunits of NOX1. For this purpose, firstly we purified the Noxa1 SH3 protein and analyzed the structure using X-ray crystallography, and subsequently, we treated the protein with two types of CAP reactors such as pulsed dielectric barrier discharge (DBD) and Soft Jet for different time intervals. The structural deformation of Noxa1 SH3 protein was analyzed by various experimental methods (circular dichroism, fluorescence, and NMR spectroscopy) and by MD simulations. Additionally, we demonstrate the effect of CAP (DBD and Soft Jet) on the viability and expression of NOX1 in A375 cancer cells. Our results are useful to understand the structural modification/oxidation occur in protein due to reactive oxygen and nitrogen (RONS) species generated by CAP. (C) 2020 Elsevier B.V. All rights reserved.
引用
收藏
页码:2405 / 2414
页数:10
相关论文
共 54 条
[31]   Intrinsic Tryptophan Fluorescence in the Detection and Analysis of Proteins: A Focus on Forster Resonance Energy Transfer Techniques [J].
Ghisaidoobe, Amar B. T. ;
Chung, Sang J. .
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2014, 15 (12) :22518-22538
[32]  
Hess B., 2016, GROMACS USER MAN VER
[33]   Roles of Nox1 and other Nox isoforms in cancer development [J].
Kamata, Tohru .
CANCER SCIENCE, 2009, 100 (08) :1382-1388
[34]   Inactivation and Heme Degradation of Horseradish Peroxidase Induced by Discharge Plasma [J].
Ke, Zhigang ;
Huang, Qing .
PLASMA PROCESSES AND POLYMERS, 2013, 10 (08) :731-739
[35]   Identification of two distinct peptide-binding pockets in the SH3 domain of human mixed-lineage kinase 3 [J].
Kokoszka, Malgorzata E. ;
Kall, Stefanie L. ;
Khosla, Sehar ;
McGinnis, Jennifer E. ;
Lavie, Arnon ;
Kay, Brian K. .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2018, 293 (35) :13553-13565
[36]   The action of microsecond-pulsed plasma-activated media on the inactivation of human lung cancer cells [J].
Kumar, Naresh ;
Park, Ji Hoon ;
Jeon, Su Nam ;
Park, Bong Sang ;
Choi, Eun Ha ;
Attri, Pankaj .
JOURNAL OF PHYSICS D-APPLIED PHYSICS, 2016, 49 (11)
[37]   Nox enzymes and the biology of reactive oxygen [J].
Lambeth, JD .
NATURE REVIEWS IMMUNOLOGY, 2004, 4 (03) :181-189
[38]   Manipulation of Lipase Activity by the Helium Radio-Frequency, Atmospheric-Pressure Glow Discharge Plasma Jet [J].
Li, He-Ping ;
Wang, Li-Yan ;
Li, Guo ;
Jin, Li-Hua ;
Le, Pei-Si ;
Zhao, Hong-Xin ;
Xing, Xin-Hui ;
Bao, Cheng-Yu .
PLASMA PROCESSES AND POLYMERS, 2011, 8 (03) :224-229
[39]   Prediction of protein secondary structure from circular dichroism using theoretically derived spectra [J].
Louis-Jeune, Caroline ;
Andrade-Navarro, Miguel A. ;
Perez-Iratxeta, Carol .
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2012, 80 (02) :374-381
[40]   Update on Phosphate and Charged Post-Translationally Modified Amino Acid Parameters in the GROMOS Force Field [J].
Margreitter, Christian ;
Reif, Maria M. ;
Oostenbrink, Chris .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2017, 38 (10) :714-720