Somatic mutation of CDKN1B in small intestine neuroendocrine tumors

被引:255
作者
Francis, Joshua M. [1 ,2 ]
Kiezun, Adam [1 ]
Ramos, Alex H. [1 ,2 ]
Serra, Stefano [3 ]
Pedamallu, Chandra Sekhar [1 ,2 ]
Qian, Zhi Rong [2 ]
Banck, Michaela S. [4 ,5 ]
Kanwar, Rahul [4 ]
Kulkarni, Amit A. [4 ]
Karpathakis, Anna [6 ,7 ]
Manzo, Veronica [2 ]
Contractor, Tanupriya [8 ]
Philips, Juliet [2 ]
Nickerson, Elizabeth [1 ]
Nam Pho [1 ]
Hooshmand, Susanne M. [2 ]
Brais, Lauren K. [2 ]
Lawrence, Michael S. [1 ]
Pugh, Trevor [1 ]
McKenna, Aaron [1 ]
Sivachenko, Andrey [1 ]
Cibulskis, Kristian [1 ]
Carter, Scott L. [1 ]
Ojesina, Akinyemi I. [1 ,2 ]
Freeman, Samuel [2 ]
Jones, Robert T. [9 ]
Voet, Douglas [1 ]
Saksena, Gordon [1 ]
Auclair, Daniel [1 ]
Onofrio, Robert [1 ]
Shefler, Erica [1 ]
Sougnez, Carrie [1 ]
Grimsby, Jonna [1 ]
Green, Lisa [1 ]
Lennon, Niall [1 ]
Meyer, Tim [6 ,7 ]
Caplin, Martyn [7 ]
Chung, Daniel C. [10 ,11 ]
Beutler, Andreas S. [4 ,5 ]
Ogino, Shuji [2 ,12 ,13 ,14 ]
Thirlwell, Christina [6 ,7 ]
Shivdasani, Ramesh [2 ]
Asa, Sylvia L. [3 ,15 ]
Harris, Chris R. [8 ,16 ,17 ]
Getz, Gad [1 ]
Kulke, Matthew [2 ]
Meyerson, Matthew [1 ,2 ,9 ]
机构
[1] Broad Inst, Cambridge, MA USA
[2] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA 02115 USA
[3] Univ Hlth Network, Dept Pathol, Toronto, ON, Canada
[4] Mayo Clin, Div Med Oncol, Rochester, MN USA
[5] Mayo Clin, Ctr Canc, Rochester, MN USA
[6] UCL, Inst Canc, London, England
[7] Royal Free Hosp, NET Unit, London NW3 2QG, England
[8] Raymond & Beverly Sackler Fdn, New Brunswick, NJ USA
[9] Dana Farber Canc Inst, Ctr Canc Genome Discovery, Boston, MA 02115 USA
[10] Massachusetts Gen Hosp, Gastrointestinal Unit, Boston, MA 02114 USA
[11] Massachusetts Gen Hosp, Ctr Canc, Boston, MA USA
[12] Brigham & Womens Hosp, Dept Pathol, Boston, MA 02115 USA
[13] Harvard Univ, Sch Med, Boston, MA USA
[14] Harvard Univ, Sch Publ Hlth, Dept Epidemiol, Boston, MA 02115 USA
[15] Univ Toronto, Ontario Canc Inst, Toronto, ON M5S 1A1, Canada
[16] Univ Med & Dent New Jersey, Canc Inst New Jersey, New Brunswick, NJ USA
[17] Univ Med & Dent New Jersey, Dept Pediat, New Brunswick, NJ USA
关键词
DEPENDENT KINASE INHIBITOR; P27(KIP1) GENE; BREAST-CANCER; FREQUENT LOSS; MICE LACKING; SUPPRESSOR; GROWTH; HAPLOINSUFFICIENCY; HETEROZYGOSITY; ADENOCARCINOMA;
D O I
10.1038/ng.2821
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The diagnosed incidence of small intestine neuroendocrine tumors (SI-NETs) is increasing, and the underlying genomic mechanisms have not yet been defined. Using exome- and genome-sequence analysis of SI-NETs, we identified recurrent somatic mutations and deletions in CDKN1B, the cyclin-dependent kinase inhibitor gene, which encodes p27. We observed frameshift mutations of CDKN1B in 14 of 180 SI-NETs, and we detected hemizygous deletions encompassing CDKN1B in 7 out of 50 SI-NETs, nominating p27 as a tumor suppressor and implicating cell cycle dysregulation in the etiology of SI-NETs.
引用
收藏
页码:1483 / U110
页数:5
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