Hymenobacter polaris sp. nov., a psychrotolerant bacterium isolated from an Arctic station

被引:9
作者
Dahal, Ram Hari [1 ]
Chaudhary, Dhiraj Kumar [2 ]
Kim, Dong-Uk [3 ]
Kim, Jaisoo [1 ]
机构
[1] Kyonggi Univ, Coll Nat Sci, Dept Life Sci, Suwon 16227, Kyonggi Do, South Korea
[2] Korea Univ, Dept Environm Engn, Sejong City 30019, South Korea
[3] Sangji Univ, Coll Sci & Engn, Dept Biol Sci, Wonju, South Korea
基金
新加坡国家研究基金会;
关键词
Hymenobacter polaris; psychrotolerant; Bacteroidetes; Hymenobacteraceae; Arctic soil; EMENDED DESCRIPTION; ALGORITHM; SANDSTONE;
D O I
10.1099/ijsem.0.004356
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A pink-pigmented, non-motile, Gram-stain-negative, rod-shaped bacterium, designated RP-2-7(T), was obtained from soil sampled at the Arctic station, Spitsbergen, Svalbard, Norway. Cells were strictly aerobic, psychrotolerant, grew optimally at 15-20 degrees Cand hydrolysed CM-cellulose. Phylogenetic analysis based on its 16S rRNA gene sequence revealed that strain RP-2-7(T) formed a lineage within the family Hymenobacteraceae and clustered with members of the genus Hymenobacter. Its closest relative was Hymenobacter marinus KJ035(T) (97.6% sequence similarity). The sequence similarities to other strains were <= 96.9%. The principal respiratory quinone was MK-7 and the major polar lipids were phosphatidylethanolamine and an unidentified aminophospholipid. The predominant cellular fatty acids were summed feature 3 (C-16(:1) omega 7c and/or C-16(:1) omega 6c), anteiso-C-15;0, iso-C-15:0, C-16:1 omega 5c and summed featured 4 (iso-C-17:1 I and/or anteiso-C-17:1 B). The DNA G+C content was 62.8 mol%. In addition, the average nucleotide identity and in silico DNA-DNA hybridization relatedness values between strain RP-2-7(T) and closely related strains were lower than species demarcation thresholds. Based on the resuls of genomic. chemotaxonomic. phenotypic and phylogenetic analyses, strain RP-2-7(T) represents novel species in the genus Hymenobacter, for which the name Hymenobacter polaris sp. nov. is proposed. The type strain is RP-2-7(T) (=KACC 21670(T)=NBRC 114391(T)).
引用
收藏
页码:4890 / 4896
页数:7
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