The complete chloroplast genome ofDendrocalamus hamiltonii(Poaceae, Bambuseae)

被引:1
作者
Zhang, Ruli [1 ,2 ]
Zhang, Yu-Xiao [1 ,3 ]
Liu, Weiyi [1 ,2 ]
Hui, Chaomao [1 ,2 ]
机构
[1] Southwest Forestry Univ, Sympodial Bamboos Technol & Engn Res Ctr SymBTERC, Natl Forestry & Grassland Adm NFGA, Kunming 650224, Yunnan, Peoples R China
[2] Southwest Forestry Univ, Inst Bamboo & Rattan, Kunming, Yunnan, Peoples R China
[3] Southwest Forestry Univ, Yunnan Acad Biodivers, Kunming, Yunnan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词
Dendrocalamus hamiltonii; chloroplast genome; phylogenomic;
D O I
10.1080/23802359.2020.1772696
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Dendrocalamushamiltoniiis one of the best bamboo species with bamboo shoots, and has higher economic value. The chloroplast genome is a circular molecule of 139404 bp in length, consisting of a 82938 bp large single copy region (LSC), a 12876 bp small single copy region (SSC), and a pair of inverted repeats region (IRa and IRb: 21795 bp each). The GC content of chloroplast genome is 38.9%. The cp genome contains a total of 133 genes, including 86 protein-coding genes, 8 rRNA genes, and 39 tRNA genes. Moreover, phylogenomic analysis showed thatD. hamiltoniiandD. brandisiiclustered together in one branch.
引用
收藏
页码:2320 / 2321
页数:2
相关论文
共 7 条
[1]  
Darriba D, 2019, MODELTEST NG NEW SCA
[2]  
JIN JJ, 2018, GETORGANELLE SIMPLE
[3]  
Kozlov AM, 2019, RAXML NG FAST SCALAB
[4]  
Rozewicki J, 2019, NUCL ACIDS RES, V47, P5
[5]   CPGAVAS2, an integrated plastome sequence annotator and analyzer [J].
Shi, Linchun ;
Chen, Haimei ;
Jiang, Mei ;
Wang, Liqiang ;
Wu, Xi ;
Huang, Linfang ;
Liu, Chang .
NUCLEIC ACIDS RESEARCH, 2019, 47 (W1) :W65-W73
[6]  
Wang BW, 2019, FOREST INVENTORY PLA, V44, P158
[7]  
Yang YM, 2019, YUNNAN BAMBOO FLORA, P231