Effects of plant host species and plant community richness on streptomycete community structure

被引:35
作者
Bakker, Matthew G. [1 ]
Bradeen, James M. [1 ]
Kinkel, Linda L. [1 ]
机构
[1] Univ Minnesota, Dept Plant Pathol, St Paul, MN 55108 USA
基金
美国国家科学基金会;
关键词
streptomycete; Streptomyces; microbial community structure; plant-driven selection; pyrosequencing; MICROBIAL COMMUNITIES; ECOSYSTEM FUNCTION; SOIL; DIVERSITY; BIODIVERSITY; DISEASES; 16S;
D O I
10.1111/1574-6941.12017
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We investigated soil streptomycete communities associated with four host plant species (two warm season C4 grasses: Andropogon gerardii, Schizachyrium scoparium and two legumes: Lespedeza capitata, Lupinus perennis), grown in plant communities varying in species richness. We used actinobacteria-selective PCR coupled with pyrosequencing to characterize streptomycete community composition and structure. The greatest pairwise distances between communities were observed in contrasts between monocultures of different plant species, indicating that plant species exert distinct selective effects on soil streptomycete populations. Increasing plant richness altered the composition and structure of streptomycete communities associated with each host plant species. Significant relationships between plant community characteristics, soil edaphic characteristics, and streptomycete community structure suggest that host plant effects on soil microbial communities may be mediated through changes to the soil environment. Co-occurring streptomycete taxa also shared consistent relationships with soil edaphic properties, providing further indication of the importance of habitat preference for taxon occurrence. Physical distance between sampling points had a significant influence on streptomycete community similarity. This work provides a detailed characterization of soil streptomycete populations across a field scale and in relation to plant host identity and plant community richness.
引用
收藏
页码:596 / 606
页数:11
相关论文
共 56 条
[1]  
[Anonymous], 123 U MINN
[2]  
[Anonymous], 2011, R: A Language and Environment for Statistical Computing
[3]   An ABC Transporter Mutation Alters Root Exudation of Phytochemicals That Provoke an Overhaul of Natural Soil Microbiota [J].
Badri, Dayakar V. ;
Quintana, Naira ;
El Kassis, Elie G. ;
Kim, Hye Kyong ;
Choi, Young Hae ;
Sugiyama, Akifumi ;
Verpoorte, Robert ;
Martinoia, Enrico ;
Manter, Daniel K. ;
Vivanco, Jorge M. .
PLANT PHYSIOLOGY, 2009, 151 (04) :2006-2017
[4]  
Bastian M., 2009, INT AAAI C WEBL SOC, DOI DOI 10.13140/2.1.1341.1520
[5]   Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere [J].
Berg, Gabriele ;
Smalla, Kornelia .
FEMS MICROBIOLOGY ECOLOGY, 2009, 68 (01) :1-13
[6]   Divergent composition but similar function of soil food webs of individual plants: plant species and community effects [J].
Bezemer, T. M. ;
Fountain, M. T. ;
Barea, J. M. ;
Christensen, S. ;
Dekker, S. C. ;
Duyts, H. ;
van Hal, R. ;
Harvey, J. A. ;
Hedlund, K. ;
Maraun, M. ;
Mikola, J. ;
Mladenov, A. G. ;
Robin, C. ;
de Ruiter, P. C. ;
Scheu, S. ;
Setala, H. ;
Smilauer, P. ;
van der Putten, W. H. .
ECOLOGY, 2010, 91 (10) :3027-3036
[7]   Root exudates regulate soil fungal community composition and diversty [J].
Broeckling, Corey D. ;
Broz, Amanda K. ;
Bergelson, Joy ;
Manter, Daniel K. ;
Vivanco, Jorge M. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (03) :738-744
[8]   Plant neighbor identity influences plant biochemistry and physiology related to defense [J].
Broz, Amanda K. ;
Broeckling, Corey D. ;
De-la-Pena, Clelia ;
Lewis, Matthew R. ;
Greene, Erick ;
Callaway, Ragan M. ;
Sumner, Lloyd W. ;
Vivanco, Jorge M. .
BMC PLANT BIOLOGY, 2010, 10
[9]   The influence of tropical plant diversity and composition on soil microbial communities [J].
Carney, Karen M. ;
Matson, Pamela A. .
MICROBIAL ECOLOGY, 2006, 52 (02) :226-238
[10]   Stochastic and deterministic processes interact in the assembly of desert microbial communities on a global scale [J].
Caruso, Tancredi ;
Chan, Yuki ;
Lacap, Donnabella C. ;
Lau, Maggie C. Y. ;
McKay, Christopher P. ;
Pointing, Stephen B. .
ISME JOURNAL, 2011, 5 (09) :1406-1413