Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs)

被引：149

作者：

Jiang, N ^{[1
]}

Feschotte, C ^{[1
]}

Zhang, XY ^{[1
]}

Wessler, SR ^{[1
]}

机构：

[1] Univ Georgia, Dept Plant Biol & Genet, Athens, GA 30602 USA

来源：

CURRENT OPINION IN PLANT BIOLOGY | 2004年 / 7卷 / 02期

基金：

美国国家科学基金会;

关键词：

D O I：

10.1016/j.pbi.2004.01.004

中图分类号：

Q94 [植物学];

学科分类号：

071001 ;

摘要：

Recent studies of rice miniature inverted repeat transposable elements (MITEs), largely fueled by the availability of genomic sequence, have provided answers to many of the outstanding questions regarding the existence of active MITEs, their source of transposases (TPases) and their chromosomal distribution. Although many questions remain about MITE origins and mode of amplification, data accumulated over the past two years have led to the formulation of testable models.

引用

页码：115 / 119

页数：5

共 47 条

[11] Sequence and analysis of rice chromosome 4 [J].

Feng, Q ;

Zhang, YJ ;

Hao, P ;

Wang, SY ;

Fu, G ;

Huang, YC ;

Li, Y ;

Zhu, JJ ;

Liu, YL ;

Hu, X ;

Jia, PX ;

Zhang, Y ;

Zhao, Q ;

Ying, K ;

Yu, SL ;

Tang, YS ;

Weng, QJ ;

Zhang, L ;

Lu, Y ;

Mu, J ;

Lu, YQ ;

Zhang, LS ;

Yu, Z ;

Fan, DL ;

Liu, XH ;

Lu, TT ;

Li, C ;

Wu, YR ;

Sun, TG ;

Lei, HY ;

Li, T ;

Hu, H ;

Guan, JP ;

Wu, M ;

Zhang, RQ ;

Zhou, B ;

Chen, ZH ;

Chen, L ;

Jin, ZQ ;

Wang, R ;

Yin, HF ;

Cai, Z ;

Ren, SX ;

Lv, G ;

Gu, WY ;

Zhu, GF ;

Tu, YF ;

Jia, J ;

Zhang, Y ;

Chen, J .

NATURE, 2002, 420 (6913) :316-320

[12] Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon [J].

Feschotte, C ;

Mouchès, C .

MOLECULAR BIOLOGY AND EVOLUTION, 2000, 17 (05) :730-737

[13]

Feschotte C, 2003, GENETICS, V163, P747

[14] Mariner-like transposases are widespread and diverse in flowering plants [J].

Feschotte, C ;

Wessler, SR .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (01) :280-285

[15] Plant transposable elements: Where genetics meets genomics [J].

Feschotte, C ;

Jiang, N ;

Wessler, SR .

NATURE REVIEWS GENETICS, 2002, 3 (05) :329-341

[16]

Feschotte C., 2002, MOBILE DNA-UK, P1147, DOI DOI 10.1128/9781555817954.CHAP50

[17] A draft sequence of the rice genome (Oryza sativa L. ssp japonica) [J].

Goff, SA ;

Ricke, D ;

Lan, TH ;

Presting, G ;

Wang, RL ;

Dunn, M ;

Glazebrook, J ;

Sessions, A ;

Oeller, P ;

Varma, H ;

Hadley, D ;

Hutchinson, D ;

Martin, C ;

Katagiri, F ;

Lange, BM ;

Moughamer, T ;

Xia, Y ;

Budworth, P ;

Zhong, JP ;

Miguel, T ;

Paszkowski, U ;

Zhang, SP ;

Colbert, M ;

Sun, WL ;

Chen, LL ;

Cooper, B ;

Park, S ;

Wood, TC ;

Mao, L ;

Quail, P ;

Wing, R ;

Dean, R ;

Yu, YS ;

Zharkikh, A ;

Shen, R ;

Sahasrabudhe, S ;

Thomas, A ;

Cannings, R ;

Gutin, A ;

Pruss, D ;

Reid, J ;

Tavtigian, S ;

Mitchell, J ;

Eldredge, G ;

Scholl, T ;

Miller, RM ;

Bhatnagar, S ;

Adey, N ;

Rubano, T ;

Tusneem, N .

SCIENCE, 2002, 296 (5565) :92-100

[18] Retrotransposons of rice involved in mutations induced by tissue culture [J].

Hirochika, H ;

Sugimoto, K ;

Otsuki, Y ;

Tsugawa, H ;

Kanda, M .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (15) :7783-7788

[19] The genome sequence of the malaria mosquito Anopheles gambiae [J].

Holt, RA ;

Subramanian, GM ;

Halpern, A ;

Sutton, GG ;

Charlab, R ;

Nusskern, DR ;

Wincker, P ;

Clark, AG ;

Ribeiro, JMC ;

Wides, R ;

Salzberg, SL ;

Loftus, B ;

Yandell, M ;

Majoros, WH ;

Rusch, DB ;

Lai, ZW ;

Kraft, CL ;

Abril, JF ;

Anthouard, V ;

Arensburger, P ;

Atkinson, PW ;

Baden, H ;

de Berardinis, V ;

Baldwin, D ;

Benes, V ;

Biedler, J ;

Blass, C ;

Bolanos, R ;

Boscus, D ;

Barnstead, M ;

Cai, S ;

Center, A ;

Chatuverdi, K ;

Christophides, GK ;

Chrystal, MA ;

Clamp, M ;

Cravchik, A ;

Curwen, V ;

Dana, A ;

Delcher, A ;

Dew, I ;

Evans, CA ;

Flanigan, M ;

Grundschober-Freimoser, A ;

Friedli, L ;

Gu, ZP ;

Guan, P ;

Guigo, R ;

Hillenmeyer, ME ;

Hladun, SL .

SCIENCE, 2002, 298 (5591) :129-+

[20] An active DNA transposon family in rice [J].

Jiang, N ;

Bao, ZR ;

Zhang, XY ;

Hirochika, H ;

Eddy, SR ;

McCouch, SR ;

Wessler, SR .

NATURE, 2003, 421 (6919) :163-167

← 1 2 3 4 5 →