Strategies for crystallizing membrane proteins

被引:97
|
作者
Garavito, RM
Picot, D
Loll, PJ
机构
[1] UNIV CHICAGO, DEPT BIOCHEM & MOLEC BIOL, CHICAGO, IL 60637 USA
[2] INST BIOL PHYSICOCHIM, F-75005 PARIS, FRANCE
[3] UNIV PENN, SCH MED, DEPT PHARMACOL, PHILADELPHIA, PA 19104 USA
关键词
membrane proteins; crystallization; nonionic detergents; protein detergent interactions; monodispersity;
D O I
10.1007/BF02150674
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
Crystallizing membrane proteins remains a challenging endeavor despite the increasing number of membrane protein structures solved by X-ray crystallography. The critical factors in determining the success of the crystallization experiments are the purification and preparation of membrane protein samples. Moreover, there is the added complication that the crystallization conditions must be optimized for use in the presence of detergents although the methods used to crystallize most membrane proteins are, in essence, straightforward applications of standard methodologies for soluble protein crystallization. The roles that detergents play in the stability and aggregation of membrane proteins as well as the colloidal properties of the protein-detergent complexes need to be appreciated and controlled before and during the crystallization trials. All X-ray quality crystals of membrane proteins were grown from preparations of detergent-solubilized protein, where the heterogeneous natural lipids from the membrane have been replaced by a homogeneous detergent environment. It is the preparation of such monodisperse, isotropic solutions of membrane proteins that has allowed the successful application of the standard crystallization methods routinely used on soluble proteins. In this review, the issues of protein purification and sample preparation are addressed as well as the new refinements in crystallization methodologies for membrane proteins. How the physical behavior of the detergent, in the form of micelles or protein-detergent aggregates, affects crystallization and the adaptation of published protocols to new membrane protein systems are also addressed. The general conclusion is that many integral membrane proteins could be crystallized if pure and monodisperse preparations in a suitable detergent system can be prepared.
引用
收藏
页码:13 / 27
页数:15
相关论文
共 50 条
  • [1] An efficient screening method for purifying and crystallizing membrane proteins using modified clear -native PAGE
    Suzuki, Nanao
    Takamuku, Yuuki
    Asakawa, Tomohiro
    Inai, Makoto
    Hino, Tomoya
    Iwata, So
    Kan, Toshiyuki
    Murata, Takeshi
    ANALYTICAL BIOCHEMISTRY, 2018, 548 : 7 - 14
  • [2] High-throughput automated system for crystallizing membrane proteins in lipidic mesophases
    Peddi, Avinash
    Muthusubramaniam, Lalitha
    Zheng, Yuan R.
    Cherezov, Vadim
    Misquitta, Yohann
    Caffrey, Martin
    IEEE TRANSACTIONS ON AUTOMATION SCIENCE AND ENGINEERING, 2007, 4 (02) : 129 - 140
  • [3] Crystallizing membrane proteins for structure-function studies using lipidic mesophases
    Caffrey, Martin
    BIOCHEMICAL SOCIETY TRANSACTIONS, 2011, 39 : 725 - 732
  • [4] Bicelle crystallization A new method for crystallizing membrane proteins yields a monomeric bacteriorhodopsin structure
    Faham, S
    Bowie, JU
    JOURNAL OF MOLECULAR BIOLOGY, 2002, 316 (01) : 1 - 6
  • [5] A comprehensive review of the lipid cubic phase or in meso method for crystallizing membrane and soluble proteins and complexes
    Caffrey, Martin
    ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2015, 71 : 3 - 18
  • [6] Crystallizing proteins on the basis of their precipitation diagram determined using a microfluidic formulator
    Sommer, MOA
    Larsen, S
    JOURNAL OF SYNCHROTRON RADIATION, 2005, 12 : 779 - 785
  • [7] Post-expression strategies for structural investigations of membrane proteins
    Columbus, Linda
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2015, 32 : 131 - 138
  • [8] Sample preparation strategies for improving the identification of membrane proteins by mass spectrometry
    Alfonso-Garrido, Javier
    Garcia-Calvo, Estefania
    Luque-Garcia, Jose L.
    ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2015, 407 (17) : 4893 - 4905
  • [9] Sample preparation strategies for improving the identification of membrane proteins by mass spectrometry
    Javier Alfonso-Garrido
    Estefania Garcia-Calvo
    Jose L. Luque-Garcia
    Analytical and Bioanalytical Chemistry, 2015, 407 : 4893 - 4905
  • [10] Detergents for the stabilization and crystallization of membrane proteins
    Prive, Gilbert G.
    METHODS, 2007, 41 (04) : 388 - 397