On the optimally weighted z-test for combining probabilities from independent studies

被引:31
作者
Chen, Zhongxue [1 ]
Nadarajah, Saralees [2 ]
机构
[1] Indiana Univ, Sch Publ Hlth, Dept Epidemiol & Biostat, Bloomington, IN 47405 USA
[2] Univ Manchester, Sch Math, Manchester M13 9PL, Lancs, England
关键词
Meta-analysis; Weighted z-test; Generalized Fisher test; P-VALUES; ASSOCIATION; METHYLATION; COMBINATION;
D O I
10.1016/j.csda.2013.09.005
中图分类号
TP39 [计算机的应用];
学科分类号
081203 ; 0835 ;
摘要
Researchers have shown that the optimally weighted z-test, where the weights are the standardized expected difference in means, is more powerful than other methods when combining p-values from independent studies. However, in practice the effect for each independent study is usually unknown, which makes the optimally weighted z-test not applicable. A new test similar to the optimally weighted z-test, but with the effects being estimated from data, is derived. This new test is another generalized Fisher test which can be very powerful under certain situations. The new test is compared with existing methods through simulated data. Some suggestions for choosing tests to combine p-values from independent studies are given. The use of the new test is also illustrated by a real data application. (C) 2013 Elsevier B.V. All rights reserved.
引用
收藏
页码:387 / 394
页数:8
相关论文
共 28 条
[1]  
[Anonymous], 1954, HDB SOCIAL PSYCHOL
[2]  
[Anonymous], 1932, STAT METHODS RES WOR
[3]   Cisplatin-versus carboplatin-based chemotherapy in first-line treatment of advanced non-small-cell lung cancer: An individual patient data meta-analysis [J].
Ardizzoni, Andrea ;
Boni, Luca ;
Tiseo, Marcello ;
Fossella, Frank V. ;
Schiller, Joan H. ;
Paesmans, Marianne ;
Radosavljevic, Davorin ;
Paccagnella, Adriano ;
Zatloukal, Petr ;
Mazzanti, Paola ;
Bisset, Donald ;
Rosell, Rafael .
JOURNAL OF THE NATIONAL CANCER INSTITUTE, 2007, 99 (11) :847-857
[4]   ASYMPTOTICALLY OPTIMAL METHODS OF COMBINING TESTS [J].
BERK, RH ;
COHEN, A .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1979, 74 (368) :812-814
[5]   COMBINING INDEPENDENT TESTS OF SIGNIFICANCE [J].
BIRNBAUM, A .
JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 1954, 49 (267) :559-574
[6]   Is the weighted z-test the best method for combining probabilities from independent tests? [J].
Chen, Z. .
JOURNAL OF EVOLUTIONARY BIOLOGY, 2011, 24 (04) :926-930
[7]  
Chen Z., 2013, STAT METHODS MED RES, DOI DOI 10.1177/0962280212474061.PUBLISHED
[8]  
Chen Z., 2013, BMC MED GENOMICS S1, V6, P59
[9]  
Chen Z., 2009, STAT MED, V28, p[1537, 2959]
[10]   Design and analysis of multiple diseases genome-wide association studies without controls [J].
Chen, Zhohgxue ;
Huang, Hanwen ;
Ng, Hon Keung Tony .
GENE, 2012, 510 (01) :87-92