Illuminating RNA Biology: Tools for Imaging RNA in Live Mammalian Cells

被引:66
|
作者
Braselmann, Esther [1 ]
Rathbun, Colin [1 ]
Richards, Erin M. [1 ]
Palmer, Amy E. [1 ]
机构
[1] Univ Colorado, BioFrontiers Inst, Dept Biochem, 3415 Colorado Ave, Boulder, CO 80309 USA
来源
CELL CHEMICAL BIOLOGY | 2020年 / 27卷 / 08期
基金
美国国家卫生研究院;
关键词
SINGLE MESSENGER-RNAS; IN-VIVO; FLUORESCENT PROTEIN; PSEUDOMONAS-AERUGINOSA; TRANSLATION DYNAMICS; GENE-EXPRESSION; BINDING; VISUALIZATION; TRANSCRIPTION; FLUOROPHORE;
D O I
10.1016/j.chembiol.2020.06.010
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The central dogma teaches us that DNA makes RNA, which in turn makes proteins, the main building blocks of the cell. But this over simplified linear transmission of information overlooks the vast majority of the genome produces RNAs that do not encode proteins and the myriad ways that RNA regulates cellular functions. Historically, one of the challenges in illuminating RNA biology has been the lack of tools for visualizing RNA in live cells. But clever approaches for exploiting RNA binding proteins, in vitro RNA evolution, and chemical biology have resulted in significant advances in RNA visualization tools in recent years. This review provides an overview of current tools for tagging RNA with fluorescent probes and tracking their dynamics, localization andfunction in live mammalian cells.
引用
收藏
页码:891 / 903
页数:13
相关论文
共 50 条
  • [21] Multiplexed spatiotemporal tracking of RNA dynamics in live mammalian cells using fluorescence lifetime imaging microscopy
    Sarfraz, N.
    Braselmann, E.
    MOLECULAR BIOLOGY OF THE CELL, 2023, 34 (02) : 20 - 20
  • [22] Genetically encoded tools for RNA imaging in living cells
    Rath, Anna K.
    Rentmeister, Andrea
    CURRENT OPINION IN BIOTECHNOLOGY, 2015, 31 : 42 - 49
  • [23] RNA live imaging in microorganisms
    Müntjes K.
    Feldbrügge M.
    BIOspektrum, 2020, 26 (1) : 37 - 39
  • [24] Single-Molecule Imaging of RNA Splicing in Live Cells
    Rino, Jose
    Martin, Robert M.
    Carvalho, Celia
    de Jesus, Ana C.
    Carmo-Fonseca, Maria
    STRUCTURES OF LARGE RNA MOLECULES AND THEIR COMPLEXES, 2015, 558 : 571 - 585
  • [25] Imaging of endogenous RNA in live cells using sequence-activated fluorescent RNA probes
    Zheng, Haifeng
    Liu, Xiyu
    Liu, Luhui
    Hu, Jiarui
    Chen, Xianjun
    NUCLEIC ACIDS RESEARCH, 2024,
  • [26] Molecular Beacons: Powerful Tools for Imaging RNA in Living Cells
    Monroy-Contreras, Ricardo
    Vaca, Luis
    JOURNAL OF NUCLEIC ACIDS, 2011, 2011
  • [27] Imaging RNA and RNA biology using RNA mimics of green fluorescent protein
    Jaffrey, Samie
    FASEB JOURNAL, 2014, 28 (01):
  • [28] RNA interference in mammalian cells
    Brondani, V
    Kolb, F
    Billy, É
    M S-MEDECINE SCIENCES, 2002, 18 (6-7): : 665 - 667
  • [29] RNA METABOLISM OF MAMMALIAN CELLS
    DREWS, J
    KLINISCHE WOCHENSCHRIFT, 1968, 46 (10): : 513 - +
  • [30] Superresolution imaging of ribosomes and RNA polymerase in live Escherichia coli cells
    Bakshi, Somenath
    Siryaporn, Albert
    Goulian, Mark
    Weisshaar, James C.
    MOLECULAR MICROBIOLOGY, 2012, 85 (01) : 21 - 38