A Unified Framework on Generalizability of Clinical Prediction Models

被引:10
作者
Wan, Bohua [1 ]
Caffo, Brian [2 ,3 ]
Vedula, S. Swaroop [3 ]
机构
[1] Johns Hopkins Univ, Whiting Sch Engn, Dept Comp Sci, Baltimore, MD USA
[2] Johns Hopkins Univ, Johns Hopkins Bloomberg Sch Publ Hlth, Dept Biostat, Baltimore, MD USA
[3] Whiting Sch Engn, Malone Ctr Engn Healthcare, Baltimore, MD 21218 USA
来源
FRONTIERS IN ARTIFICIAL INTELLIGENCE | 2022年 / 5卷
关键词
generalizability; external validity; clinical prediction models; explainability; prognosis; diagnosis; dataset shift; EXTERNAL VALIDATION; MEASUREMENT ERROR; RISK; PROGNOSIS; THROMBOSIS; IMPACT; TOOL;
D O I
10.3389/frai.2022.872720
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
To be useful, clinical prediction models (CPMs) must be generalizable to patients in new settings. Evaluating generalizability of CPMs helps identify spurious relationships in data, provides insights on when they fail, and thus, improves the explainability of the CPMs. There are discontinuities in concepts related to generalizability of CPMs in the clinical research and machine learning domains. Specifically, conventional statistical reasons to explain poor generalizability such as inadequate model development for the purposes of generalizability, differences in coding of predictors and outcome between development and external datasets, measurement error, inability to measure some predictors, and missing data, all have differing and often complementary treatments, in the two domains. Much of the current machine learning literature on generalizability of CPMs is in terms of dataset shift of which several types have been described. However, little research exists to synthesize concepts in the two domains. Bridging this conceptual discontinuity in the context of CPMs can facilitate systematic development of CPMs and evaluation of their sensitivity to factors that affect generalizability. We survey generalizability and dataset shift in CPMs from both the clinical research and machine learning perspectives, and describe a unifying framework to analyze generalizability of CPMs and to explain their sensitivity to factors affecting it. Our framework leads to a set of signaling statements that can be used to characterize differences between datasets in terms of factors that affect generalizability of the CPMs.
引用
收藏
页数:13
相关论文
共 42 条
[1]  
Adebayo J, 2018, ADV NEUR IN, V31
[2]  
Altman DG, 1998, BRIT MED J, V317, P409
[3]   Prognosis and prognostic research: validating a prognostic model [J].
Altman, Douglas G. ;
Vergouwe, Yvonne ;
Royston, Patrick ;
Moons, Karel G. M. .
BMJ-BRITISH MEDICAL JOURNAL, 2009, 338 :1432-1435
[4]   A Novel Approach to Prediction of Mild Obstructive Sleep Disordered Breathing in a Population-Based Sample: The Sleep Heart Health Study [J].
Caffo, Brian ;
Diener-West, Marie ;
Punjabi, Naresh M. ;
Samet, Jonathan .
SLEEP, 2010, 33 (12) :1641-1648
[5]  
Collins GS, 2015, ANN INTERN MED, V162, P55, DOI [10.1002/bjs.9736, 10.1038/bjc.2014.639, 10.7326/M14-0697, 10.1016/j.jclinepi.2014.11.010, 10.7326/M14-0698, 10.1136/bmj.g7594, 10.1111/eci.12376, 10.1016/j.eururo.2014.11.025, 10.1186/s12916-014-0241-z]
[6]  
COPAS JB, 1983, J R STAT SOC C-APPL, V32, P25
[7]   Empirical evidence of the impact of study characteristics on the performance of prediction models: a meta-epidemiological study [J].
Damen, Johanna A. A. G. ;
Debray, Thomas P. A. ;
Pajouheshnia, Romin ;
Reitsma, Johannes B. ;
Scholten, Rob J. P. M. ;
Moons, Karel G. M. ;
Hooft, Lotty .
BMJ OPEN, 2019, 9 (04)
[8]   WILL HUMANS-IN-THE-LOOP BECOME BORGS? MERITS AND PITFALLS OF WORKING WITH AI [J].
Fuegener, Andreas ;
Grahl, Jorn ;
Gupta, Alok ;
Ketter, Wolfgang .
MIS QUARTERLY, 2021, 45 (03) :1527-1556
[9]  
Ghassemi M, 2021, LANCET DIGIT HEALTH, V3, pE745, DOI 10.1016/S2589-7500(21)00208-9
[10]   Prognosis research strategy (PROGRESS) 1: A framework for researching clinical outcomes [J].
Hemingway, Harry ;
Croft, Peter ;
Perel, Pablo ;
Hayden, Jill A. ;
Abrams, Keith ;
Timmis, Adam ;
Briggs, Andrew ;
Udumyan, Ruzan ;
Moons, Karel G. M. ;
Steyerberg, Ewout W. ;
Roberts, Ian ;
Schroter, Sara ;
Altman, Douglas G. ;
Riley, Richard D. .
BMJ-BRITISH MEDICAL JOURNAL, 2013, 346