Pan-cancer analysis of long non-coding RNA NEAT1 in various cancers

被引:65
作者
Li, Shufen [1 ,2 ]
Li, Jingming [1 ,2 ]
Chen, Chen [3 ]
Zhang, Rongsheng [1 ,2 ]
Wang, Kankan [1 ,2 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Med, Ruijin Hosp, State Key Lab Med Genom, Shanghai, Peoples R China
[2] Shanghai Jiao Tong Univ, Sch Med, Ruijin Hosp, Shanghai Inst Hematol, Shanghai, Peoples R China
[3] McMaster Univ, Hamilton, ON, Canada
基金
中国博士后科学基金;
关键词
Cancer; Long non-coding RNA; NEAT1; Pan-cancer analysis; Regulation; HEPATOCELLULAR-CARCINOMA; LNCRNA NEAT1; CELL-PROLIFERATION; PROGRESSION; EXPRESSION; INVASION; GROWTH; PARASPECKLES; CONTRIBUTES; MODULATION;
D O I
10.1016/j.gendis.2017.11.003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Changes in the abundance and activity of long non-coding RNAs (lncRNAs) have an important impact on the development of cancer. The nuclear paraspeckle assembly transcript 1 (NEAT1) has been reported to be overexpressed in many types of cancer since its discovery. However, inconsistencies exist as NEAT1 can also function as a tumor suppressor in certain types of cancer, such as acute promyelocytic leukemia. Here we systematically describe our current understanding of NEAT1 in tumor initiation and progression. First, we analyzed the expression patterns of NEAT1 in various normal tissues and malignant cancers using data from public data portals, the Genotype-Tissue Expression Project (GTEx) and the Cancer Genome Atlas (TCGA), together with recent progress in the study of NEAT1 in various types of cancer. Second, we discussed the functions and mechanisms of NEAT1 in modulating tumor activity. Then, the upstream transcription factors and downstream microRNA targets of NEAT1 in the transcription cascade of cancers were also summarized. These data highlight the emerging role of NEAT1 in tumorigenesis, and present promising targetable pathways and clinical opportunities for tumor prevention and classifications. Copyright (C) 2017, Chongqing Medical University. Production and hosting by Elsevier B.V.
引用
收藏
页码:27 / 35
页数:9
相关论文
共 44 条
[1]   p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity [J].
Adriaens, Carmen ;
Standaert, Laura ;
Barra, Jasmine ;
latil, MathilDe ;
Verfaillie, Annelien ;
Kalev, Peter ;
Boeckx, Bram ;
Wijnhoven, Paul W. G. ;
Radaelli, Enrico ;
Vermi, William ;
Leucci, Eleonora ;
Lapouge, Gaelle ;
Beck, Benjamin ;
van den Oord, Joost ;
Nakagawa, Shinichi ;
Hirose, Tetsuro ;
Sablina, Anna A. ;
Lambrechts, Diether ;
Aerts, Stein ;
Blanpain, Cedric ;
Marine, Jean-Christophe .
NATURE MEDICINE, 2016, 22 (08) :861-+
[2]   RUNX1 contributes to higher-order chromatin organization and gene regulation in breast cancer cells [J].
Barutcu, A. Rasim ;
Hong, Deli ;
Lajoie, Bryan R. ;
McCord, Rachel Patton ;
van Wijnen, Andre J. ;
Lian, Jane B. ;
Stein, Janet L. ;
Dekker, Job ;
Imbalzano, Anthony N. ;
Stein, Gary S. .
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS, 2016, 1859 (11) :1389-1397
[3]   p53-dependent non-coding RNA networks in chronic lymphocytic leukemia [J].
Blume, C. J. ;
Hotz-Wagenblatt, A. ;
Huellein, J. ;
Sellner, L. ;
Jethwa, A. ;
Stolz, T. ;
Slabicki, M. ;
Lee, K. ;
Sharathchandra, A. ;
Benner, A. ;
Dietrich, S. ;
Oakes, C. C. ;
Dreger, P. ;
te Raa, D. ;
Kater, A. P. ;
Jauch, A. ;
Merkel, O. ;
Oren, M. ;
Hielscher, T. ;
Zenz, T. .
LEUKEMIA, 2015, 29 (10) :2015-2023
[4]   Paraspeckles: nuclear bodies built on long noncoding RNA [J].
Bond, Charles S. ;
Fox, Archa H. .
JOURNAL OF CELL BIOLOGY, 2009, 186 (05) :637-644
[5]  
Cao J, 2016, AM J CANCER RES, V6, P2361
[6]   HuR-regulated lncRNA NEAT1 stability in tumorigenesis and progression of ovarian cancer [J].
Chai, Yiqing ;
Liu, Jie ;
Zhang, Zhikun ;
Liu, Liwei .
CANCER MEDICINE, 2016, 5 (07) :1588-1598
[7]   The oestrogen receptor alpha-regulated lncRNA NEAT1 is a critical modulator of prostate cancer [J].
Chakravarty, Dimple ;
Sboner, Andrea ;
Nair, Sujit S. ;
Giannopoulou, Eugenia ;
Li, Ruohan ;
Hennig, Sven ;
Mosquera, Juan Miguel ;
Pauwels, Jonathan ;
Park, Kyung ;
Kossai, Myriam ;
MacDonald, Theresa Y. ;
Fontugne, Jacqueline ;
Erho, Nicholas ;
Vergara, Ismael A. ;
Ghadessi, Mercedeh ;
Davicioni, Elai ;
Jenkins, Robert B. ;
Palanisamy, Nallasivam ;
Chen, Zhengming ;
Nakagawa, Shinichi ;
Hirose, Tetsuro ;
Bander, Neil H. ;
Beltran, Himisha ;
Fox, Archa H. ;
Elemento, Olivier ;
Rubin, Mark A. .
NATURE COMMUNICATIONS, 2014, 5
[8]  
Chen XJ, 2015, AM J CANCER RES, V5, P2808
[9]   Tumor hypoxia induces nuclear paraspeckle formation through HIF-2α dependent transcriptional activation of NEAT1 leading to cancer cell survival [J].
Choudhry, H. ;
Albukhari, A. ;
Morotti, M. ;
Haider, S. ;
Moralli, D. ;
Smythies, J. ;
Schoedel, J. ;
Green, C. M. ;
Camps, C. ;
Buffa, F. ;
Ratcliffe, P. ;
Ragoussis, J. ;
Harris, A. L. ;
Mole, D. R. .
ONCOGENE, 2015, 34 (34) :4482-4490
[10]   MiR-425-5p promotes invasion and metastasis of hepatocellular carcinoma cells through SCAI-mediated dysregulation of multiple signaling pathways [J].
Fang, Feng ;
Song, Tianqiang ;
Zhang, Ti ;
Cui, Yunlong ;
Zhang, Gewen ;
Xiong, Qingqing .
ONCOTARGET, 2017, 8 (19) :31758-31770