Identification of the key genes and pathways involved in B cells in primary Sjogren' s syndrome

被引:5
|
作者
Lei, Shizhen [1 ]
Zhang, Yi [2 ]
机构
[1] China Med Univ, Affiliated Hosp 4, Dept Ophthalmol, Shenyang, Peoples R China
[2] China Med Univ, Shengjing Hosp, Dept Gerontol & Geriatr, 36 Sanhao Rd, Shenyang 110004, Peoples R China
关键词
B cell; primary Sjogren' s syndrome; CIBERSORT; WGCNA; GEO; MOLECULAR-MECHANISM; ULCERATIVE-COLITIS; CLOCK GENES; EXPRESSION; MEMORY; POLYMORPHISMS; DEFICIENCY; GROWTH; ONSET; GNG7;
D O I
10.1080/21655979.2021.1930753
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Primary Sjogren' s syndrome (pSS) is a relatively common autoimmune disease, which mainly involves the exocrine glands, causing dry eye, dryness of mouth, fatigue and pain in the joints, thus severely affecting the normal lives of patients. B cell populations are considered to play an important role in their pathogenesis and pSS patients are generally characterized by exhibiting biological signs of B cell activation. Moreover, another important characterized change in the peripheral blood of pSS patients is found to be the decreased number of circulating memory B cells. However, the mechanisms underlying the B cell activation and the decreased level of circulating memory B cells in pSS patients are still unclear. Therefore, we identified key genes and pathways involved in B cells in pSS through a combination of several bioinformatic approaches including Cell-type Identification By Estimating Relative Subsets Of RNA Transcripts (CIBERSORT) and weighted gene co-expression network analysis (WGCNA) using gene expression data of pSS patients and controls from an open database Gene Expression Omnibus (GEO). The results may provide some novel insights into the pathogenesis of pSS. Moreover, we constructed and validated a diagnostic model for pSS by using the expression patterns of these key genes, which may assist clinicians in diagnosing pSS. [GRAPHICS] .
引用
收藏
页码:2055 / 2073
页数:19
相关论文
共 50 条
  • [31] JAK-STAT pathways are involved in the BAFF signaling of peripheral monocytes of patients with primary Sjogren's syndrome.
    Yoshimoto, Keiko
    Tanaka, Maiko
    Kojima, Masako
    Ogata, Hideko
    Suzuki, Katsuya
    Kameda, Hideto
    Abe, Tohru
    Takeuchi, Tsutomu
    JOURNAL OF IMMUNOLOGY, 2012, 188
  • [32] Evidence of association for primary Sjogren's syndrome candidate genes.
    Ramos, Paula S.
    Emamian, Eshrat S.
    Patel, Danielle C.
    Tobon, Liliana M.
    Behrens, Timothy W.
    Huang, Andrew J. W.
    Rhodus, Nelson L.
    Segal, Barbara
    Gaffney, Patrick M.
    Moser, Kathy L.
    ARTHRITIS AND RHEUMATISM, 2006, 54 (09): : S254 - S254
  • [33] A conspicuous role for B cells in Sjogren's syndrome
    Youinou, Pierre
    Devauchelle, Valerie
    Hutin, Pascal
    Le Berre, Rozenn
    Saraux, Alain
    Pers, Jacques-Olivier
    CLINICAL REVIEWS IN ALLERGY & IMMUNOLOGY, 2007, 32 (03) : 231 - 237
  • [34] Polarization of B effector cells in Sjogren's syndrome
    Daridon, Capucine
    Guerrier, Thomas
    Devauchelle, Valerie
    Saraux, Alain
    Pers, Jacques-Olivier
    Youinou, Pierre
    AUTOIMMUNITY REVIEWS, 2007, 6 (07) : 427 - 431
  • [35] Will targeting B cells be the answer for Sjogren's syndrome?
    Looney, R. John
    ARTHRITIS AND RHEUMATISM, 2007, 56 (05): : 1371 - 1377
  • [36] IDENTIFICATION OF BIOMARKERS AND IMMUNE PATHWAYS FOR PERSONALIZED DRUG TARGETING IN PATIENTS WITH NEWLY DIAGNOSED PRIMARY SJOGREN'S SYNDROME
    Verstappen, Gwenny M.
    Gao, Lu
    Pringle, Sarah A.
    Terpstra, Janneke H.
    Liefers, Silvia C.
    van Nimwegen, Jolien F.
    Vissink, Arjan
    Patel, Vishal
    He, Aiqing
    Truong, Amy
    Hu, Sarah
    Dongre, Ashok
    Krishnakumar, Arathi
    Kirov, Stefan
    Carman, Julie
    Bootsma, Hendrika
    Kroese, Frans G. M.
    ANNALS OF THE RHEUMATIC DISEASES, 2019, 78 : 397 - 397
  • [37] Association of Genes in the NF-κB Pathway with Antibody-Positive Primary Sjogren's Syndrome
    Nordmark, Gunnel
    Wang, Chuan
    Vasaitis, Lilian
    Eriksson, Per
    Theander, Elke
    Kvarnstrom, Marika
    Forsblad-d'Elia, Helena
    Jazebi, Helmi
    Sjowall, Christopher
    Reksten, Tove Ragna
    Brun, Johan G.
    Jonsson, Malin V.
    Johnsen, Svein J.
    Wahren-Herlenius, Marie
    Omdal, Roald
    Jonsson, Roland
    Bowman, Simon
    Ng, Wan-Fai
    Eloranta, Maija-Leena
    Syvanen, Ann-Christine
    SCANDINAVIAN JOURNAL OF IMMUNOLOGY, 2013, 78 (05) : 447 - 454
  • [38] Primary Sjogren's Syndrome
    Mariette, Xavier
    Criswell, Lindsey A.
    NEW ENGLAND JOURNAL OF MEDICINE, 2018, 378 (10): : 931 - 939
  • [39] Pathogenesis of primary Sjogren's syndrome beyond B lymphocytes
    Fasano, S.
    Mauro, D.
    Macaluso, F.
    Xiao, F.
    Zhao, Y.
    Lu, L.
    Guggino, G.
    Ciccia, F.
    CLINICAL AND EXPERIMENTAL RHEUMATOLOGY, 2020, 38 (04) : S315 - S323
  • [40] Primary Sjogren's syndrome
    Brito-Zeron, Pilar
    Ramos-Casals, Manuel
    DRUGS OF THE FUTURE, 2008, 33 (09) : 793 - 802