Hirshfeld Surfaces Identify Inadequacies in Computations of Intermolecular Interactions in Crystals: Pentamorphic 1,8-Dihydroxyanthraquinone

被引:520
作者
Rohl, Andrew L. [1 ,2 ]
Moret, Massimo [3 ]
Kaminsky, Werner [4 ]
Claborn, Kacey [4 ]
McKinnon, Joshua J. [5 ]
Kahr, Bart [4 ]
机构
[1] IVEC, Hub Adv Comp Western Australia, Kensington, NSW 6151, Australia
[2] Curtin Univ Technol, Nanochem Res Inst, Perth, WA 6845, Australia
[3] Univ Milano Bicocca, Dipartimento Sci Mat, I-20125 Milan, Italy
[4] Univ Washington, Dept Chem, Seattle, WA 98195 USA
[5] Univ Western Australia, Crawley 6009, Australia
关键词
D O I
10.1021/cg8005212
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Fingerprint plots of Hirshfeld surfaces were used to locate and analyze the deficiencies in various methodologies employed in the determination of the relative energies of five polymorphs of 1, 8-dihydroxyanthraquinone. Nine crystallographically independent molecules were characterized by X-ray crystallography and Hirshfeld surfaces were derived from the X-ray structures. The space groups and number of independent molecules (Z') for each of the polymorphs (1-5) is as follows: (1) P4(1) (or P4(3)), Z' = 1; (2) Pca2(1), Z' = 2; (3) P (1) over bar, Z' = 4; (4) P2(1)/n, Z' = 1; (5) P4(1)2(1)2 (or P4(3)2(1)2), Z' = 0.5. Form 1 is the most thermodynamically stable among the reproducible structures, as established by competitive solubility tests, followed by 2 and then 4. The unrestrained structures of the five polymorphs were computed using the CVFF and COMPASS force fields as well as with the density functional code, SIESTA.
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收藏
页码:4517 / 4525
页数:9
相关论文
共 36 条
[1]   TABLES OF BOND LENGTHS DETERMINED BY X-RAY AND NEUTRON-DIFFRACTION .1. BOND LENGTHS IN ORGANIC-COMPOUNDS [J].
ALLEN, FH ;
KENNARD, O ;
WATSON, DG ;
BRAMMER, L ;
ORPEN, AG ;
TAYLOR, R .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1987, (12) :S1-S19
[2]   A study of the known and hypothetical crystal structures of pyridine: why are there four molecules in the asymmetric unit cell? [J].
Anghel, AT ;
Day, GM ;
Price, SL .
CRYSTENGCOMM, 2002, 4 :348-355
[3]  
BERNSTEIN J, 2002, POLYMORPHISM MOL CRY, P75
[4]   CALCULATION OF SMALL MOLECULAR INTERACTIONS BY DIFFERENCES OF SEPARATE TOTAL ENERGIES - SOME PROCEDURES WITH REDUCED ERRORS [J].
BOYS, SF ;
BERNARDI, F .
MOLECULAR PHYSICS, 1970, 19 (04) :553-&
[5]   Role of desorption in the growth process of molecular organic thin films [J].
Campione, M ;
Sassella, A ;
Moret, M ;
Marcon, V ;
Raos, G .
JOURNAL OF PHYSICAL CHEMISTRY B, 2005, 109 (16) :7859-7864
[6]   Circular dichroism imaging microscopy: Application to enantiomorphous twinning in biaxial crystals of 1,8-dihydroxyanthraquinone [J].
Claborn, K ;
Puklin-Faucher, E ;
Kurimoto, M ;
Kaminsky, W ;
Kahr, B .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (48) :14825-14831
[7]   STRUCTURE AND ENERGETICS OF LIGAND-BINDING TO PROTEINS - ESCHERICHIA-COLI DIHYDROFOLATE REDUCTASE TRIMETHOPRIM, A DRUG-RECEPTOR SYSTEM [J].
DAUBEROSGUTHORPE, P ;
ROBERTS, VA ;
OSGUTHORPE, DJ ;
WOLFF, J ;
GENEST, M ;
HAGLER, AT .
PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1988, 4 (01) :31-47
[8]   A nonempirical anisotropic atom-atom model potential for chlorobenzene crystals [J].
Day, GM ;
Price, SL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (52) :16434-16443
[9]   DISAPPEARING POLYMORPHS [J].
DUNITZ, JD ;
BERNSTEIN, J .
ACCOUNTS OF CHEMICAL RESEARCH, 1995, 28 (04) :193-200
[10]  
Gavezzotti A, 2007, MOL AGGREGATION STRU