brain tumor segmentation;
computer vision;
deep learning;
MRI;
ATTENTION;
NETWORKS;
D O I:
10.1002/mp.14392
中图分类号:
R8 [特种医学];
R445 [影像诊断学];
学科分类号:
1002 ;
100207 ;
1009 ;
摘要:
Purpose Recently, research on brain tumor segmentation has made great progress. However, ambiguous patterns in magnetic resonance imaging data and linear fusion omitting semantic gaps between features in different branches remain challenging. We need to design a mechanism to fully utilize the similarity within the spatial space and channel space and the correlation between these two spaces to improve the result of volumetric segmentation. Methods We propose a revised cascade structure network. In each subnetwork, a context exploitation module is introduced between the encoder and decoder, in which the dual attention mechanism is adopted to learn the information within the spatial space and channel space, and space interaction learning is employed to model the relation between the spatial and channel spaces. Results Extensive experiments on the BraTS19 dataset have evaluated that our approach improves the dice coefficient (DC) by a margin of 2.1, 2.0, and 1.4 for whole tumor (WT), tumor core (TC), and enhancing tumor (ET), respectively, obtaining results competitive with the state-of-art approaches working on brain tumor segmentation. Conclusions Context exploitation in the embedding feature spaces, including intraspace relations and interspace relations, can effectively model dependency in semantic features and alleviate the semantic gap in multimodel data. Our approach is also robust to variations in different modality.
机构:
Shandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Xue, Jie
He, Kelei
论文数: 0引用数: 0
h-index: 0
机构:
Nanjing Univ, Med Sch, Natl Inst Healthcare Data Sci, Nanjing 210023, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
He, Kelei
Nie, Dong
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Nie, Dong
Adeli, Ehsan
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Adeli, Ehsan
Shi, Zhenshan
论文数: 0引用数: 0
h-index: 0
机构:
Fujian Med Univ, Affiliated Hosp 1, Dept Radiol, Fuzhou 350005, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Shi, Zhenshan
Lee, Seong-Whan
论文数: 0引用数: 0
h-index: 0
机构:
Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South KoreaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Lee, Seong-Whan
Zheng, Yuanjie
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Sch Informat Sci & Engn, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Zheng, Yuanjie
Liu, Xiyu
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Business Sch, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Liu, Xiyu
Li, Dengwang
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Sch Phys & Elect, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Li, Dengwang
Shen, Dinggang
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USA
Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South KoreaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
机构:
Shandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Xue, Jie
He, Kelei
论文数: 0引用数: 0
h-index: 0
机构:
Nanjing Univ, Med Sch, Natl Inst Healthcare Data Sci, Nanjing 210023, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
He, Kelei
Nie, Dong
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Nie, Dong
Adeli, Ehsan
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USAShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Adeli, Ehsan
Shi, Zhenshan
论文数: 0引用数: 0
h-index: 0
机构:
Fujian Med Univ, Affiliated Hosp 1, Dept Radiol, Fuzhou 350005, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Shi, Zhenshan
Lee, Seong-Whan
论文数: 0引用数: 0
h-index: 0
机构:
Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South KoreaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Lee, Seong-Whan
Zheng, Yuanjie
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Sch Informat Sci & Engn, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Zheng, Yuanjie
Liu, Xiyu
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Business Sch, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Liu, Xiyu
Li, Dengwang
论文数: 0引用数: 0
h-index: 0
机构:
Shandong Normal Univ, Sch Phys & Elect, Jinan 250014, Peoples R ChinaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China
Li, Dengwang
Shen, Dinggang
论文数: 0引用数: 0
h-index: 0
机构:
Univ N Carolina, Dept Radiol, Chapel Hill, NC 27515 USA
Univ N Carolina, Biomed Res Imaging Ctr, Chapel Hill, NC 27515 USA
Korea Univ, Dept Brain & Cognit Engn, Seoul 02841, South KoreaShandong Normal Univ, Shandong Key Lab Med Phys & Image Proc, Business Sch, Jinan 250014, Peoples R China