A new cross contamination aware routing method with intelligent path exploration in Digital Microfluidic Biochips

被引:0
作者
Roy, Pranab [1 ]
Howladar, Pampa [1 ]
Bhattacharjee, Rupam [1 ]
Rahaman, Hafizur [1 ]
Dasgupta, Parthasarathi
机构
[1] Bengal Engn & Sci Univ, Sch VLSI Technol, Sibpur, India
来源
2013 8TH INTERNATIONAL CONFERENCE ON DESIGN & TECHNOLOGY OF INTEGRATED SYSTEMS IN NANOSCALE ERA (DTIS) | 2013年
关键词
digital microfluidics; Cross contamination; routing; detour; algorithm; resource utilization; ELECTROWETTING-BASED ACTUATION; LIQUID DROPLETS; CHIP;
D O I
暂无
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
Digital microfluidic systems in recent years have been developed as an alternative platform for execution of multiple conventional laboratory methods simultaneously on a single planar 2D array of electrodes targeted for biochemical analysis and biomedical applications. Due to its discrete nature droplets can be manipulated through multiple reconfigurable paths derived by preprogrammed electrode actuation sequences through this planar array known as digital microfluidic biochip system. Cross contamination between heterogeneous samples turns out to be a major issue concerned with transportation of droplets and correctness of the detection results for the bioassay protocols -which is highly significant for clinical diagnostics and toxicity monitoring applications. In this paper we have proposed an intelligent route path exploration technique that attempts partially or completely to avoid the number of cross contamination depending on the fluidic constraints employed during routing The path is further refined using intelligent detour by identifying zones of friction between two adjacent route paths that optimizes the overall route time by reducing the overall time for stalling while routing -as well as further optimization of resources to be utilized. The simulation is carried out on test benches of benchmark suite I and benchmark suite III. The results show improvement in overall as well as average route time and major reduction in the number of crossovers.
引用
收藏
页码:50 / 55
页数:6
相关论文
共 50 条
[41]   A Cooperative Multiagent Reinforcement Learning Framework for Droplet Routing in Digital Microfluidic Biochips [J].
Jiang, Chen ;
Yang, Rongquan ;
Xu, Qi ;
Yao, Hailong ;
Ho, Tsung-Yi ;
Yuan, Bo .
IEEE TRANSACTIONS ON COMPUTER-AIDED DESIGN OF INTEGRATED CIRCUITS AND SYSTEMS, 2023, 42 (09) :3007-3020
[42]   A Path-Driven Fluid Routing and Scheduling Method for Continuous-Flow Microfluidic Biochips with Delay Time Optimization [J].
Chen, Zhisheng ;
Liu, Bowen ;
Su, Hongjin ;
Chen, Zhen ;
Liu, Genggeng ;
Huang, Xing .
MICROMACHINES, 2025, 16 (06)
[43]   Co-Optimization of Droplet Routing and Pin Assignment in Disposable Digital Microfluidic Biochips [J].
Zhao, Yang ;
Chakrabarty, Krishnendu .
ISPD 11: PROCEEDINGS OF THE 2011 ACM/SIGDA INTERNATIONAL SYMPOSIUM ON PHYSICAL DESIGN, 2011, :69-76
[44]   Performance Improvements and Congestion Reduction for Routing-Based Synthesis for Digital Microfluidic Biochips [J].
Windh, Skyler ;
Calvin Phung ;
Grissom, Daniel T. ;
Pop, Paul ;
Brisk, Philip .
IEEE TRANSACTIONS ON COMPUTER-AIDED DESIGN OF INTEGRATED CIRCUITS AND SYSTEMS, 2017, 36 (01) :41-54
[45]   Defect Aware Droplet Routing Technique in Digital Microfluidic Biochip [J].
Mukherjee, Subhamita ;
Banerjee, Indrajit ;
Samanta, Tuhina .
SOUVENIR OF THE 2014 IEEE INTERNATIONAL ADVANCE COMPUTING CONFERENCE (IACC), 2014, :30-35
[46]   Droplet Transportation in MEDA-Based Biochips: An Enhanced Technique for Intelligent Cross-Contamination Avoidance [J].
Howladar, Pampa ;
Roy, Pranab ;
Rahaman, Hafizur .
IEEE TRANSACTIONS ON VERY LARGE SCALE INTEGRATION (VLSI) SYSTEMS, 2021, 29 (07) :1451-1464
[47]   Multi-terminal PCB Escape Routing for Digital Microfluidic Biochips using Negotiated Congestion [J].
McDaniel, Jeffrey ;
Grissom, Daniel ;
Brisk, Philip .
2014 22ND INTERNATIONAL CONFERENCE ON VERY LARGE SCALE INTEGRATION (VLSI-SOC), 2014,
[48]   Simultaneous Optimization of Droplet Routing and Control-Pin Mapping to Electrodes in Digital Microfluidic Biochips [J].
Zhao, Yang ;
Chakrabarty, Krishnendu .
IEEE TRANSACTIONS ON COMPUTER-AIDED DESIGN OF INTEGRATED CIRCUITS AND SYSTEMS, 2012, 31 (02) :242-254
[49]   Structural Modelling, Design Automation, and a Generalized Routing Technique for Digital Microfluidic Biochips with Hexagonal Electrodes [J].
Dutta, Amartya ;
Majumder, Riya ;
Dhal, Debasis ;
Pal, Rajat Kumar .
PROCEEDINGS OF 2019 IEEE REGION 10 SYMPOSIUM (TENSYMP), 2019, :337-342
[50]   Pin Addressing Method Based on an SVM With a Reliability Constraint in Digital Microfluidic Biochips [J].
Shi, Jinlong ;
Fu, Ping ;
Zheng, Wenbin .
IEEE ACCESS, 2020, 8 :199792-199802