Non-linear quantitative structure-activity relationship for adenine derivatives as competitive inhibitors of adenosine deaminase

被引:8
作者
Hayatshahi, SHS
Abdolmaleki, P
Safarian, S
Khajeh, K
机构
[1] Tarbiat Modares Univ, Dept Biophys, Fac Sci, Tehran, Iran
[2] Univ Tehran, Fac Sci, Dept Biol, Tehran, Iran
[3] Tarbiat Modares Univ, Fac Sci, Dept Biochem, Tehran, Iran
关键词
adenosine deaminase; multiple linear regression; logistic regression; artificial neural network; inhibitors;
D O I
10.1016/j.bbrc.2005.10.049
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Logistic regression and artificial neural networks have been developed as two non-linear models to establish quantitative structure-activity relationships between structural descriptors and biochemical activity of adenosine based competitive inhibitors, toward adenosine deaminase. The training set included 24 compounds with known k(i) values. The models were trained to solve two-class problems. Unlike the previous work in which multiple linear regression was used, the highest of positive charge on the molecules was recognized to be in close relation with their inhibition activity, while the electric charge on atom N1 of adenosine was found to be a poor descriptor. Consequently, the previously developed equation was improved and the newly formed one could predict the class of 91.66% of compounds correctly. Also optimized 2-3-1 and 3-4-1 neural networks could increase this rate to 95.83%. (c) 2005 Elsevier Inc. All rights reserved.
引用
收藏
页码:1137 / 1142
页数:6
相关论文
共 17 条
[1]   QSARs for 6-azasteroids as inhibitors of human type 1 5α-reductase:: Prediction of binding affinity and selectivity relative to 3-BHSD [J].
Bakken, GA ;
Jurs, PC .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2001, 41 (05) :1255-1265
[2]  
Cristalli G, 2001, MED RES REV, V21, P105, DOI 10.1002/1098-1128(200103)21:2<105::AID-MED1002>3.0.CO
[3]  
2-U
[4]  
GLAZER RI, 1980, CANCER CHEMOTH PHARM, V4, P227
[5]   Comparison of logistic regression and neural network-based classifiers for bacterial growth [J].
Hajmeer, M ;
Basheer, I .
FOOD MICROBIOLOGY, 2003, 20 (01) :43-55
[6]   Co-administration of adenosine kinase and deaminase inhibitors produces supra-additive potentiation of N-methyl-D-aspartate-evoked adenosine formation in cortex [J].
Hebb, MO ;
White, TD .
EUROPEAN JOURNAL OF PHARMACOLOGY, 1998, 344 (2-3) :121-125
[7]  
JOHNSTON JB, 1986, CANCER RES, V46, P2179
[8]   Development of quantitative structure-activity relationship and classification models for a set of carbonic anhydrase inhibitors [J].
Mattioni, BE ;
Jurs, PC .
JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, 2002, 42 (01) :94-102
[9]   QSAR analysis for ADA upon interaction with a series of adenine derivatives as inhibitors [J].
Moosavi-Movahedi, AA ;
Safarian, S ;
Hakimelahi, GH ;
Ataei, G ;
Ajloo, D ;
Panjehpour, S ;
Riahi, S ;
Mousavi, MF ;
Mardanyan, S ;
Soltani, N ;
Khalafi-Nezhad, A ;
Sharghi, H ;
Moghadamnia, H ;
Saboury, AA .
NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS, 2004, 23 (03) :613-624
[10]   ADENOSINE-DEAMINASE IN HERPES-SIMPLEX VIRUS-INDUCED CORNEAL STROMAL DISEASE [J].
OBRIEN, WJ ;
TAYLOR, JL ;
BROTMAN, SJ .
CURRENT EYE RESEARCH, 1987, 6 (01) :13-18