Role of internal motions and molecular geometry on the NMR relaxation of hydrocarbons

被引:29
|
作者
Singer, P. M. [1 ]
Asthagiri, D. [1 ]
Chen, Z. [1 ]
Parambathu, A. Valiya [1 ]
Hirasaki, G. J. [1 ]
Chapman, W. G. [1 ]
机构
[1] Rice Univ, Dept Chem & Biomol Engn, 6100 Main St, Houston, TX 77005 USA
来源
JOURNAL OF CHEMICAL PHYSICS | 2018年 / 148卷 / 16期
关键词
NUCLEAR-MAGNETIC-RESONANCE; SPIN-LATTICE-RELAXATION; NEMATIC LIQUID-CRYSTAL; MODEL-FREE APPROACH; DYNAMICS SIMULATIONS; SPECTRAL DENSITIES; TRANSLATIONAL DIFFUSION; ROTATIONAL-DIFFUSION; POLYMER DYNAMICS; CROSS-RELAXATION;
D O I
10.1063/1.5023240
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The role of internal motions and molecular geometry on H-1 NMR relaxation rates in liquid-state hydrocarbons is investigated using MD (molecular dynamics) simulations of the autocorrelation functions for intramolecular and intermolecular H-1-H-1 dipole-dipole interactions. The effects of molecular geometry and internal motions on the functional form of the autocorrelation functions are studied by comparing symmetric molecules such as neopentane and benzene to corresponding straight-chain alkanes n-pentane and n-hexane, respectively. Comparison of rigid versus flexible molecules shows that internal motions cause the intramolecular and intermolecular correlation-times to get significantly shorter, and the corresponding relaxation rates to get significantly smaller, especially for longer-chain n-alkanes. Site-by-site simulations of H-1's across the chains indicate significant variations in correlation times and relaxation rates across the molecule, and comparison with measurements reveals insights into cross-relaxation effects. Furthermore, the simulations reveal new insights into the relative strength of intramolecular versus intermolecular relaxation as a function of internal motions, as a function of molecular geometry, and on a site-by-site basis across the chain. Published by AIP Publishing.
引用
收藏
页数:10
相关论文
共 50 条
  • [41] Molecular dynamics simulations vs field-cycling NMR relaxometry: Structural relaxation mechanisms in the glass-former glycerol revisited
    Becher, M.
    Wohlfromm, T.
    Roessler, E. A.
    Vogel, M.
    JOURNAL OF CHEMICAL PHYSICS, 2021, 154 (12):
  • [42] Analysis of Molecular Interaction of Drugs within β-Cyclodextrin Cavity by Solution-State NMR Relaxation
    Kumar, Deepak
    Krishnan, Yogeshwaran
    Paranjothy, Manikandan
    Pal, Samanwita
    JOURNAL OF PHYSICAL CHEMISTRY B, 2017, 121 (13): : 2864 - 2872
  • [43] Local Ordering at Mobile Sites in Proteins: Combining Perspectives from NMR Relaxation and Molecular Dynamics
    Tchaicheeyan, Oren
    Mendelman, Netanel
    Zerbetto, Mirco
    Meirovitch, Eva
    JOURNAL OF PHYSICAL CHEMISTRY B, 2019, 123 (13): : 2745 - 2755
  • [44] Predicting NMR relaxation of proteins from molecular dynamics simulations with accurate methyl rotation barriers
    Hoffmann, Falk
    Mulder, Frans A. A.
    Schaefer, Lars V.
    JOURNAL OF CHEMICAL PHYSICS, 2020, 152 (08):
  • [45] Dynamics of dehaloperoxidase-hemoglobin A derived from NMR relaxation spectroscopy and molecular dynamics simulation
    Zhao, Jing
    Xue, Mengjun
    Gudanis, Dorota
    Gracz, Hanna
    Findenegg, Gerhard H.
    Gdaniec, Zofia
    Franzen, Stefan
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2018, 181 : 65 - 73
  • [46] Proton NMR relaxation study of molecular dynamics of chromonic liquid crystal Edicol Sunset Yellow
    Cachitas, Hugo
    Sebastiao, Pedro J.
    Feio, Gabriel
    Chavez, Fabian Vaca
    LIQUID CRYSTALS, 2014, 41 (08) : 1080 - 1089
  • [47] Backbone motions in a crystalline protein from field-dependent 2H-NMR relaxation and line-shape analysis
    Mack, JW
    Usha, MG
    Long, J
    Griffin, RG
    Wittebort, RJ
    BIOPOLYMERS, 2000, 53 (01) : 9 - 18
  • [48] Dual reorientation relaxation routes of water molecules in oxyanion's hydration shell: A molecular geometry perspective
    Xie, Wen Jun
    Yang, Yi Isaac
    Gao, Yi Qin
    JOURNAL OF CHEMICAL PHYSICS, 2015, 143 (22):
  • [49] NMR study of role of the cross-relaxation effect in the cortex and the nucleus rabbit lens fragments
    Bodurka, J
    Buntkowsky, G
    Gutsze, A
    Masierak, W
    COLLOIDS AND SURFACES A-PHYSICOCHEMICAL AND ENGINEERING ASPECTS, 1999, 158 (1-2) : 115 - 119
  • [50] Inter- and Intramolecular Relaxation in Molecular Liquids by Field Cycling 1H NMR Relaxometry
    Meier, R.
    Kruk, D.
    Bourdick, A.
    Schneider, E.
    Roessler, E. A.
    APPLIED MAGNETIC RESONANCE, 2013, 44 (1-2) : 153 - 168