A Nondiscriminating Glutamyl-tRNA Synthetase in the Plasmodium Apicoplast THE FIRST ENZYME IN AN INDIRECT AMINOACYLATION PATHWAY

被引:17
作者
Mailu, Boniface M.
Ramasamay, Gowthaman
Mudeppa, Devaraja G. [2 ]
Li, Ling
Lindner, Scott E.
Peterson, Megan J. [1 ]
DeRocher, Amy E. [1 ]
Kappe, Stefan H. I. [1 ,3 ]
Rathod, Pradipsinh K. [2 ,3 ]
Gardner, Malcolm J. [1 ,3 ]
机构
[1] Seattle Biomed Res Inst, Seattle, WA 98109 USA
[2] Univ Washington, Dept Chem, Seattle, WA 98195 USA
[3] Univ Washington, Dept Global Hlth, Seattle, WA 98195 USA
基金
美国国家卫生研究院;
关键词
Aminoacyl tRNA Synthetase; Malaria; Nucleic Acid Enzymology; Plasmodium; Transfer RNA (tRNA); Apicoplast; MULTIPLE SEQUENCE ALIGNMENTS; ZINC-BINDING SITE; ESCHERICHIA-COLI; AMINO-ACID; GENOME SEQUENCE; ANTICODON RECOGNITION; HELICOBACTER-PYLORI; MALARIA PARASITES; STRUCTURAL BASIS; CIRCULAR DNA;
D O I
10.1074/jbc.M113.507467
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The malaria parasite Plasmodium falciparum and related organisms possess a relict plastid known as the apicoplast. Apicoplast protein synthesis is a validated drug target in malaria because antibiotics that inhibit translation in prokaryotes also inhibit apicoplast protein synthesis and are sometimes used for malaria prophylaxis or treatment. We identified components of an indirect aminoacylation pathway for Gln-tRNA(Gln) biosynthesis in Plasmodium that we hypothesized would be essential for apicoplast protein synthesis. Here, we report our characterization of the first enzyme in this pathway, the apicoplast glutamyl-tRNA synthetase (GluRS). We expressed the recombinant P. falciparum enzyme in Escherichia coli, showed that it is nondiscriminating because it glutamylates both apicoplast tRNA(Glu) and tRNA(Gln), determined its kinetic parameters, and demonstrated its inhibition by a known bacterial GluRS inhibitor. We also localized the Plasmodium berghei ortholog to the apicoplast in blood stage parasites but could not delete the PbGluRS gene. These data show that Gln-tRNA(Gln) biosynthesis in the Plasmodium apicoplast proceeds via an essential indirect aminoacylation pathway that is reminiscent of bacteria and plastids.
引用
收藏
页码:32539 / 32552
页数:14
相关论文
共 108 条
[1]   The Universal Protein Resource (UniProt) in 2010 [J].
Apweiler, Rolf ;
Martin, Maria Jesus ;
O'Donovan, Claire ;
Magrane, Michele ;
Alam-Faruque, Yasmin ;
Antunes, Ricardo ;
Barrell, Daniel ;
Bely, Benoit ;
Bingley, Mark ;
Binns, David ;
Bower, Lawrence ;
Browne, Paul ;
Chan, Wei Mun ;
Dimmer, Emily ;
Eberhardt, Ruth ;
Fedotov, Alexander ;
Foulger, Rebecca ;
Garavelli, John ;
Huntley, Rachael ;
Jacobsen, Julius ;
Kleen, Michael ;
Laiho, Kati ;
Leinonen, Rasko ;
Legge, Duncan ;
Lin, Quan ;
Liu, Wudong ;
Luo, Jie ;
Orchard, Sandra ;
Patient, Samuel ;
Poggioli, Diego ;
Pruess, Manuela ;
Corbett, Matt ;
di Martino, Giuseppe ;
Donnelly, Mike ;
van Rensburg, Pieter ;
Bairoch, Amos ;
Bougueleret, Lydie ;
Xenarios, Ioannis ;
Altairac, Severine ;
Auchincloss, Andrea ;
Argoud-Puy, Ghislaine ;
Axelsen, Kristian ;
Baratin, Delphine ;
Blatter, Marie-Claude ;
Boeckmann, Brigitte ;
Bolleman, Jerven ;
Bollondi, Laurent ;
Boutet, Emmanuel ;
Quintaje, Silvia Braconi ;
Breuza, Lionel .
NUCLEIC ACIDS RESEARCH, 2010, 38 :D142-D148
[2]   Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-coffee [J].
Armougom, Fabrice ;
Moretti, Sebastien ;
Poirot, Olivier ;
Audic, Stephane ;
Dumas, Pierre ;
Schaeli, Basile ;
Keduas, Vladimir ;
Notredame, Cedric .
NUCLEIC ACIDS RESEARCH, 2006, 34 :W604-W608
[3]   PlasmoDB: a functional genomic database for malaria parasites [J].
Aurrecoechea, Cristina ;
Brestelli, John ;
Brunk, Brian P. ;
Dommer, Jennifer ;
Fischer, Steve ;
Gajria, Bindu ;
Gao, Xin ;
Gingle, Alan ;
Grant, Greg ;
Harb, Omar S. ;
Heiges, Mark ;
Innamorato, Frank ;
Iodice, John ;
Kissinger, Jessica C. ;
Kraemer, Eileen ;
Li, Wei ;
Miller, John A. ;
Nayak, Vishal ;
Pennington, Cary ;
Pinney, Deborah F. ;
Roos, David S. ;
Ross, Chris ;
Stoeckert, Christian J., Jr. ;
Treatman, Charles ;
Wang, Haiming .
NUCLEIC ACIDS RESEARCH, 2009, 37 :D539-D543
[4]  
Baick JW, 2004, J MICROBIOL, V42, P111
[5]   The transamidosome: A dynamic ribonucleoprotein particle dedicated to prokaryotic tRNA-Dependent asparagine biosynthesis [J].
Bailly, Marc ;
Blaise, Mickaael ;
Lorber, Bernard ;
Becker, Hubert Dominique ;
Kern, Daniel .
MOLECULAR CELL, 2007, 28 (02) :228-239
[6]   Discovery of a new boron-containing antifungal agent, 5-fluoro-1,3-dihydro-1-hydroxy-2,1-benzoxaborole (AN2690), for the potential treatment of onychomycosis [J].
Baker, Stephen J. ;
Zhang, Yong-Kang ;
Akama, Tsutomu ;
Lau, Agnes ;
Zhou, Huchen ;
Hernandez, Vincent ;
Mao, Weimin ;
Alley, M. R. K. ;
Sanders, Virginia ;
Plattner, Jacob J. .
JOURNAL OF MEDICINAL CHEMISTRY, 2006, 49 (15) :4447-4450
[7]   The zinc-binding site of a class I aminoacyl-tRNA synthetase is a SWIM domain that modulates amino acid binding via the tRNA acceptor arm [J].
Banerjee, R ;
Dubois, DY ;
Gauthier, J ;
Lin, SX ;
Roy, S ;
Lapointe, J .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 2004, 271 (04) :724-733
[8]   Glutamylsulfamoyladenosine and pyroglutamylsulfamoyladenosine are competitive inhibitors of E-coli glutamyl-tRNA synthetase [J].
Bernier, S ;
Dubois, DY ;
Habegger-Polomat, C ;
Gagnon, LP ;
Lapointe, J ;
Chênevert, R .
JOURNAL OF ENZYME INHIBITION AND MEDICINAL CHEMISTRY, 2005, 20 (01) :61-67
[9]   A genomic glimpse of aminoacyl-tRNA synthetases in malaria parasite Plasmodium falciparum [J].
Bhatt, Tarun Kumar ;
Kapil, Charu ;
Khan, Sameena ;
Jairajpuri, Mohamad Aman ;
Sharma, Vinay ;
Santoni, Daniele ;
Silvestrini, Francesco ;
Pizzi, Elisabetta ;
Sharma, Amit .
BMC GENOMICS, 2009, 10
[10]   Plasmodial Aspartyl-tRNA Synthetases and Peculiarities in Plasmodium falciparum [J].
Bour, Tania ;
Akaddar, Aziza ;
Lorber, Bernard ;
Blais, Sebastien ;
Balg, Christian ;
Candolfi, Ermanno ;
Frugier, Magali .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (28) :18893-18903