Self-assembling of large ordered DNA arrays using superhydrophobic patterned surfaces

被引:33
作者
Ciasca, G. [1 ]
Businaro, L. [2 ]
Papi, M. [1 ]
Notargiacomo, A. [2 ]
Chiarpotto, M. [1 ]
De Ninno, A. [2 ]
Palmieri, V. [1 ]
Carta, S. [2 ]
Giovine, E. [2 ]
Gerardino, A. [2 ]
De Spirito, M. [1 ]
机构
[1] Univ Cattolica SC, Ist Fis, I-00168 Rome, Italy
[2] CNR, Ist Foton & Nanotecnol, I-00156 Rome, Italy
关键词
SCATTERING; DESIGN;
D O I
10.1088/0957-4484/24/49/495302
中图分类号
TB3 [工程材料学];
学科分类号
0805 ; 080502 ;
摘要
In this paper we present a simple and robust method to realize highly ordered arrays of stretched and suspended DNA molecules over the millimeter length scale. To this end we used an ad hoc designed superhydrophobic surface made of high aspect-ratio silicon pillars, where we deposited a droplet containing genomic DNA. A precise positioning of DNA strands was achieved by shaping the silicon pillars so that sharpened features resembling tips were included. Such features allowed us to accurately control the droplet de-wetting dynamics, pinning DNA strands in a well-defined position above pillars. The proposed technique has the potential to positively impact on the development of novel DNA chips for genetic analysis.
引用
收藏
页数:7
相关论文
共 27 条
[1]   In Situ X-ray Scattering Studies of Protein Solution Droplets Drying on Micro- and Nanopatterned Superhydrophobic PMMA Surfaces [J].
Accardo, Angelo ;
Gentile, Francesco ;
Mecarini, Federico ;
De Angelis, Francesco ;
Bughammer, Manfred ;
Di Fabrizio, Enzo ;
Riekel, Christian .
LANGMUIR, 2010, 26 (18) :15057-15064
[2]   Design and Production of a Chimeric Resilin-, Elastin-, and Collagen-Like Engineered Polypeptide [J].
Bracalello, Angelo ;
Santopietro, Valentina ;
Vassalli, Massimo ;
Marletta, Giovanni ;
Del Gaudio, Rosanna ;
Bochicchio, Brigida ;
Pepe, Antonietta .
BIOMACROMOLECULES, 2011, 12 (08) :2957-2965
[3]   DNA-templated assembly and electrode attachment of a conducting silver wire [J].
Braun, E ;
Eichen, Y ;
Sivan, U ;
Ben-Yoseph, G .
NATURE, 1998, 391 (6669) :775-778
[4]   Long range electronic transport in DNA molecules deposited across a disconnected array of metallic nanoparticles [J].
Chepelianskii, Alexei D. ;
Klinov, D. ;
Kasumov, A. ;
Gueron, S. ;
Pietrement, O. ;
Lyonnais, S. ;
Bouchiat, H. .
COMPTES RENDUS PHYSIQUE, 2012, 13 (9-10) :967-992
[5]   Wet sample confinement by superhydrophobic patterned surfaces for combined X-ray fluorescence and X-ray phase contrast imaging [J].
Ciasca, G. ;
Businaro, L. ;
De Ninno, A. ;
Cedola, A. ;
Notargiacomo, A. ;
Campi, G. ;
Papi, M. ;
Ranieri, A. ;
Carta, S. ;
Giovine, E. ;
Gerardino, A. .
MICROELECTRONIC ENGINEERING, 2013, 111 :304-309
[6]  
De Angelis F, 2011, NAT PHOTONICS, V5, P683, DOI [10.1038/NPHOTON.2011.222, 10.1038/nphoton.2011.222]
[7]   Small- and wide-angle elastic light scattering study of fibrin structure [J].
De Spirito, M ;
Arcòvito, G ;
Papi, M ;
Rocco, M ;
Ferri, F .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 2003, 36 (01) :636-641
[8]   Direct Imaging of DNA Fibers: The Visage of Double Helix [J].
Gentile, Francesco ;
Moretti, Manola ;
Limongi, Tania ;
Falqui, Andrea ;
Bertoni, Giovanni ;
Scarpellini, Alice ;
Santoriello, Stefania ;
Maragliano, Luca ;
Zaccaria, Remo Proietti ;
di Fabrizio, Enzo .
NANO LETTERS, 2012, 12 (12) :6453-6458
[9]   Generating highly ordered DNA nanostrand arrays [J].
Guan, JJ ;
Lee, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (51) :18321-18325
[10]  
Lebofsky Ronald, 2003, Briefings in Functional Genomics & Proteomics, V1, P385, DOI 10.1093/bfgp/1.4.385