CLB19, a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts

被引:226
作者
Chateigner-Boutin, Anne-Laure [1 ]
Ramos-Vega, Maricela [2 ]
Guevara-Garcia, Arturo [2 ]
Andres, Charles [1 ,3 ]
Gutierrez-Nava, Maria de la Luz [2 ]
Cantero, Araceli [2 ]
Delannoy, Etienne [1 ]
Jimenez, Luis Felipe [4 ]
Lurin, Claire [3 ]
Small, Ian [1 ,3 ]
Leon, Patricia [2 ]
机构
[1] Univ Western Australia, ARC Ctr Excellence Plant Energy Biol, Perth, WA 6009, Australia
[2] Univ Nacl Autonoma Mexico, Inst Biotecnol, Dept Biol Mol Plantas, Cuernavaca 62271, Morelos, Mexico
[3] Univ Evry Val Essonne, CNRS, INRA, Unite Rech Genom Vegetale, F-91057 Evry, France
[4] Univ Nacl Autonoma Mexico, Fac Ciencias, Lab Microscopia Elect, Mexico City 04510, DF, Mexico
基金
澳大利亚研究理事会;
关键词
chloroplast development; PPR proteins; chloroplast RNA editing; RNA polymerase; Arabidopsis;
D O I
10.1111/j.1365-313X.2008.03634.x
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
RNA editing changes the sequence of many transcripts in plant organelles, but little is known about the molecular mechanisms determining the specificity of the process. In this study, we have characterized CLB19 (also known as PDE247), a gene that is required for editing of two distinct chloroplast transcripts, rpoA and clpP. Loss-of-function clb19 mutants present a yellow phenotype with impaired chloroplast development and early seedling lethality under greenhouse conditions. Transcript patterns are profoundly affected in the mutant plants, with a pattern entirely consistent with a defect in activity of the plastid-encoded RNA polymerase. CLB19 encodes a pentatricopeptide repeat protein similar to the editing specificity factors CRR4 and CRR21, but, unlike them, is implicated in editing of two target sites.
引用
收藏
页码:590 / 602
页数:13
相关论文
共 56 条
[1]   Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants [J].
Allison, LA ;
Simon, LD ;
Maliga, P .
EMBO JOURNAL, 1996, 15 (11) :2802-2809
[2]   Genome-wide Insertional mutagenesis of Arabidopsis thaliana [J].
Alonso, JM ;
Stepanova, AN ;
Leisse, TJ ;
Kim, CJ ;
Chen, HM ;
Shinn, P ;
Stevenson, DK ;
Zimmerman, J ;
Barajas, P ;
Cheuk, R ;
Gadrinab, C ;
Heller, C ;
Jeske, A ;
Koesema, E ;
Meyers, CC ;
Parker, H ;
Prednis, L ;
Ansari, Y ;
Choy, N ;
Deen, H ;
Geralt, M ;
Hazari, N ;
Hom, E ;
Karnes, M ;
Mulholland, C ;
Ndubaku, R ;
Schmidt, I ;
Guzman, P ;
Aguilar-Henonin, L ;
Schmid, M ;
Weigel, D ;
Carter, DE ;
Marchand, T ;
Risseeuw, E ;
Brogden, D ;
Zeko, A ;
Crosby, WL ;
Berry, CC ;
Ecker, JR .
SCIENCE, 2003, 301 (5633) :653-657
[3]   The multifarious roles of PPR proteins in plant mitochondrial gene expression [J].
Andres, Charles ;
Lurin, Claire ;
Small, Ian D. .
PHYSIOLOGIA PLANTARUM, 2007, 129 (01) :14-22
[4]   Participation of nuclear genes in chloroplast gene expression [J].
Barkan, A ;
Goldschmidt-Clermont, M .
BIOCHIMIE, 2000, 82 (6-7) :559-572
[5]   GENETIC-ANALYSIS OF CHLOROPLAST BIOGENESIS IN HIGHER-PLANTS [J].
BARKAN, A ;
VOELKER, R ;
MENDELHARTVIG, J ;
JOHNSON, D ;
WALKER, M .
PHYSIOLOGIA PLANTARUM, 1995, 93 (01) :163-170
[6]  
BECHTOLD N, 1993, CR ACAD SCI III-VIE, V316, P1194
[7]   Cross-competition in transgenic chloroplasts expressing single editing sites reveals shared cis elements [J].
Chateigner-Boutin, AL ;
Hanson, MR .
MOLECULAR AND CELLULAR BIOLOGY, 2002, 22 (24) :8448-8456
[8]   A rapid high-throughput method for the detection and quantification of RNA editing based on high-resolution melting of amplicons [J].
Chateigner-Boutin, Anne-Laure ;
Small, Ian .
NUCLEIC ACIDS RESEARCH, 2007, 35 (17)
[9]   Dual-domain, dual-targeting organellar protein presequences in Arabidopsis can use non-AUG start codons [J].
Christensen, AC ;
Lyznik, A ;
Mohammed, S ;
Elowsky, CG ;
Elo, A ;
Yule, R ;
Mackenzie, SA .
PLANT CELL, 2005, 17 (10) :2805-2816
[10]   GENOMIC SEQUENCING [J].
CHURCH, GM ;
GILBERT, W .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (07) :1991-1995