Isolation and characterization of a novel indigenous intestinal N4-related coliphage vB_EcoP_G7C

被引:49
作者
Kulikov, Eugene [1 ]
Kropinski, Andrew M. [2 ,3 ]
Golomidova, Alla [1 ]
Lingohr, Erika [2 ,3 ]
Govorun, Vadim [4 ]
Serebryakova, Marina [4 ]
Prokhorov, Nikolai [1 ]
Letarova, Maria [1 ]
Manykin, Anatolij [5 ]
Strotskaya, Alexandra [1 ]
Letarov, Andrey [1 ]
机构
[1] Russian Acad Sci, Winogradsky Inst Microbiol, Moscow 117312, Russia
[2] Publ Hlth Agcy Canada, Lab Foodbome Dis, Guelph, ON N1G 3W4, Canada
[3] Univ Guelph, Dept Mol & Cellular Biol, Guelph, ON N1G 2W1, Canada
[4] Fed Med Biol Agcy, Inst Physicochem Med, Moscow 113435, Russia
[5] Russian Acad Med Sci, Ivanovsky Inst Virol, Moscow 123098, Russia
基金
加拿大自然科学与工程研究理事会;
关键词
Escherichia coli; Podoviridae; N4; Lytic phage; Complete genome sequence; Sequence analysis; Proteomics; Tail fiber; N4-like coliphage; Enterobacteria bacteriophage; OUTER-MEMBRANE-PROTEIN; RNA-POLYMERASE; BACTERIOPHAGE; GENES; N4; VIRUSES; GENOME; PHAGES; DNA; REVEALS;
D O I
10.1016/j.virol.2012.01.027
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Lytic coliphage vB_EcoP_G7C and several other highly related isolates were obtained repeatedly from the samples of horse feces held in the same stable thus representing a component of the normal indigenous intestinal communities in this population of animals. The genome of G7C consists of 71,759 bp with terminal repeats of about 1160 bp, yielding approximately 73 kbp packed DNA size. Seventy-eight potential open reading frames, most of them unique to N4-like viruses, were identified and annotated. The overall layout of functional gene groups was close to that of the original N4 phage, with some important changes in late gene area including new tail fiber proteins containing hydrolytic domains. Structural proteome analysis confirmed all the predicted subunits of the viral particle. Unlike N4 itself, phage G7C did not exhibit a lysis-inhibited phenotype. (C) 2012 Elsevier Inc. All rights reserved.
引用
收藏
页码:93 / 99
页数:7
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