The plant microbiome

被引:803
作者
Turner, Thomas R. [1 ]
James, Euan K. [2 ]
Poole, Philip S. [1 ]
机构
[1] John Innes Ctr Plant Sci Res, Norwich NR4 7UH, Norfolk, England
[2] James Hutton Inst, Dundee DD2 5DA, Scotland
来源
GENOME BIOLOGY | 2013年 / 14卷 / 06期
基金
英国生物技术与生命科学研究理事会;
关键词
Endophyte; microbiome; phyllosphere; rhizosphere; BACTERIAL COMMUNITY; RICE ROOTS; RHIZOSPHERE MICROBIOME; POTENTIAL IMPACT; SUGAR-CANE; SOIL; ARABIDOPSIS; DIVERSITY; INFECTION; 2,4-DIACETYLPHLOROGLUCINOL;
D O I
10.1186/gb-2013-14-6-209
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Plant genomes contribute to the structure and function of the plant microbiome, a key determinant of plant health and productivity. High-throughput technologies are revealing interactions between these complex communities and their hosts in unprecedented detail.
引用
收藏
页数:10
相关论文
共 106 条
  • [91] Microorganisms and climate change: terrestrial feedbacks and mitigation options
    Singh, Brajesh K.
    Bardgett, Richard D.
    Smith, Pete
    Reay, Dave S.
    [J]. NATURE REVIEWS MICROBIOLOGY, 2010, 8 (11) : 779 - 790
  • [92] How do plants achieve immunity? Defence without specialized immune cells
    Spoel, Steven H.
    Dong, Xinnian
    [J]. NATURE REVIEWS IMMUNOLOGY, 2012, 12 (02) : 89 - 100
  • [93] A plant receptor-like kinase required for both bacterial and fungal symbiosis
    Stracke, S
    Kistner, C
    Yoshida, S
    Mulder, L
    Sato, S
    Kaneko, T
    Tabata, S
    Sandal, N
    Stougaard, J
    Szczyglowski, K
    Parniske, M
    [J]. NATURE, 2002, 417 (6892) : 959 - 962
  • [94] Cellulose utilization in forest litter and soil: identification of bacterial and fungal decomposers
    Stursova, Martina
    Zifcakova, Lucia
    Leigh, Mary Beth
    Burgess, Robert
    Baldrian, Petr
    [J]. FEMS MICROBIOLOGY ECOLOGY, 2012, 80 (03) : 735 - 746
  • [95] Common Features of Environmental and Potentially Beneficial Plant-Associated Burkholderia
    Suarez-Moreno, Zulma Rocio
    Caballero-Mellado, Jesus
    Coutinho, Bruna G.
    Mendonca-Previato, Lucia
    James, Euan K.
    Venturi, Vittorio
    [J]. MICROBIAL ECOLOGY, 2012, 63 (02) : 249 - 266
  • [96] Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica
    Teixeira, Lia C. R. S.
    Peixoto, Raquel S.
    Cury, Juliano C.
    Sul, Woo Jun
    Pellizari, Vivian H.
    Tiedje, James
    Rosado, Alexandre S.
    [J]. ISME JOURNAL, 2010, 4 (08) : 989 - 1001
  • [97] The Human Microbiome Project
    Turnbaugh, Peter J.
    Ley, Ruth E.
    Hamady, Micah
    Fraser-Liggett, Claire M.
    Knight, Rob
    Gordon, Jeffrey I.
    [J]. NATURE, 2007, 449 (7164) : 804 - 810
  • [98] Comparative metatranscriptomics reveals kingdom level changes in the rhizosphere microbiome of plants
    Turner, Thomas R.
    Ramakrishnan, Karunakaran
    Walshaw, John
    Heavens, Darren
    Alston, Mark
    Swarbreck, David
    Osbourn, Anne
    Grant, Alastair
    Poole, Philip S.
    [J]. ISME JOURNAL, 2013, 7 (12) : 2248 - 2258
  • [99] Early responses of rice (Oryza sativa L.) seedlings to inoculation with beneficial diazotrophic bacteria are dependent on plant and bacterial genotypes
    Vargas, Livia
    Gurjao de Carvalho, Thais Louise
    Gomes Ferreira, Paulo Cavalcanti
    Divan Baldani, Vera Lucia
    Baldani, Jose Ivo
    Hemerly, Adriana Silva
    [J]. PLANT AND SOIL, 2012, 356 (1-2) : 127 - 137
  • [100] SHR5:: a novel plant receptor kinase involved in plant-N2-fixing endophytic bacteria association
    Vinagre, F
    Vargas, C
    Schwarcz, K
    Cavalcante, J
    Nogueira, EM
    Baldani, JI
    Ferreira, PCG
    Hemerly, AS
    [J]. JOURNAL OF EXPERIMENTAL BOTANY, 2006, 57 (03) : 559 - 569