Flavobacterium foetidum sp nov., isolated from ginseng soil

被引:7
作者
Bu, Ji-Hye [1 ]
Cha, Chang-Jun [1 ]
机构
[1] Chung Ang Univ, Dept Syst Biotechnol, Anseong 17546, South Korea
关键词
Flavobacterium; Bacteroidetes; 16S rRNA gene; ginseng soil; PANACISOLI SP NOV; GENUS FLAVOBACTERIUM; EMENDED DESCRIPTIONS; LIPID-COMPOSITION; SEQUENCES; FAMILY; TREES;
D O I
10.1099/ijsem.0.002553
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-staining-negative bacterial strain, designated CJ42(T), was isolated from ginseng soil in Anseong, Republic of Korea. Cells were rod-shaped, yellow-pigmented, aerobic and devoid of flagella but showed gliding motility. Strain CJ42(T) grew optimally at 30 degrees C and pH 7.0 in the absence of NaCl on tryptic soy agar. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain CJ42(T) belonged to the genus Flavobacterium within the family Flavobacteriaceae and was most closely related to Flavobacterium tistrianum KCTC 42679(T) (97.3% similarity). Flexirubin-type pigments were produced. The only respiratory quinone was menaquinone 6. The predominant polar lipids were phosphatidylethanolamine, an unknown aminolipid and two unknown lipids. The major fatty acids of strain CJ42(T) were iso-C-15 : 0 and summed feature 3 (comprising C-16 : 1 omega 7c and/or C-16 : 1 omega 6c). The G+C content of the genomic DNA was 30.7 mol%. Based on the polyphasic analyses, strain CJ42(T) represents a novel species in the genus Flavobacterium, for which the name Flavobacterium foetidum sp. nov. is proposed. The type strain is CJ42(T) (=KACC 19302=JCM 32085).
引用
收藏
页码:616 / 622
页数:7
相关论文
共 31 条
[1]  
Bergey DH, 1923, Bergey's Manual of Determinative Bacteriology, P97
[2]  
Bernardet J.-F., 2011, BERGEYS MANUAL SYSTE, V4, P112
[3]   Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978) [J].
Bernardet, JF ;
Segers, P ;
Vancanneyt, M ;
Berthe, F ;
Kersters, K ;
Vandamme, P .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (01) :128-148
[4]  
Bernardet JF, 2002, INT J SYST EVOL MICR, V52, P1049, DOI [10.1099/ijs.0.02136-0, 10.1099/00207713-52-3-1049]
[5]   Cohnella saccharovorans sp nov., isolated from ginseng soil [J].
Choi, Jung-Hye ;
Seok, Ji-Hye ;
Jang, Ho-Jin ;
Cha, Ju-Hee ;
Cha, Chang-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 :1713-1717
[6]   Lysobacter panacisoli sp nov., isolated from ginseng soil [J].
Choi, Jung-Hye ;
Seok, Ji-Hye ;
Cha, Ju-Hee ;
Cha, Chang-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 :2193-2197
[7]   Bacillus panacisoli sp nov., isolated from ginseng soil [J].
Choi, Jung-Hye ;
Cha, Chang-Jun .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2014, 64 :901-906
[8]  
Collins M. D., 1985, METHOD MICROBIOL, V18, P329, DOI DOI 10.1016/S0580-9517(08)70480-X
[9]   Flavobacterium hauense sp nov., isolated from soil and emended descriptions of Flavobacterium subsaxonicum, Flavobacterium beibuense and Flavobacterium rivuli [J].
Dong, Kun ;
Xu, Biao ;
Zhu, Fengqiu ;
Wang, Gejiao .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :3237-3242
[10]   Flavobacterium enshiense sp nov., isolated from soil, and emended descriptions of the genus Flavobacterium and Flavobacterium cauense, Flavobacterium saliperosum and Flavobacterium suncheonense [J].
Dong, Kun ;
Chen, Fang ;
Du, Yan ;
Wang, Gejiao .
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 :886-892