Combining the fourth-corner and the RLQ methods for assessing trait responses to environmental variation

被引:458
作者
Dray, Stephane [1 ,2 ]
Choler, Philippe [3 ,4 ]
Doledec, Sylvain [1 ,5 ]
Peres-Neto, Pedro R. [6 ]
Thuiller, Wilfried [3 ]
Pavoine, Sandrine [7 ,8 ]
ter Braak, Cajo J. F. [9 ]
机构
[1] Univ Lyon, F-69000 Lyon, France
[2] Univ Lyon 1, CNRS, UMR5558, Lab Biometrie & Biol Evolut, F-69622 Villeurbanne, France
[3] Univ Grenoble 1, Lab Ecol Alpine, UMR CNRS UJF 5553, F-38041 Grenoble, France
[4] Univ Grenoble 1, Stn Alpine J Fourier, UMS CNRS UJF 3370, F-38041 Grenoble, France
[5] Univ Lyon 1, CNRS, UMR5023, Lab Ecol Hydrosyst Nat & Anthropises, F-69622 Villeurbanne, France
[6] Univ Quebec, Dept Sci Biol, Canada Res Chair Spatial Modelling & Biodivers, Montreal, PQ H3C 3P8, Canada
[7] Museum Natl Hist Nat, Dept Ecol & Gest Biodiversite, UMR CNRS MNHN 7204, F-75231 Paris, France
[8] Univ Oxford, Dept Zool, Math Ecol Res Grp, Oxford OX1 3PS, England
[9] Wageningen Univ, NL-6700 AP Wageningen, Netherlands
关键词
Alps; fourth-corner matrix; functional ecology; permutation procedures; RLQ tables; trait-environment relationship; CO-INERTIA ANALYSIS; SPECIES TRAITS; COMMUNITY ECOLOGY; PLANT; VARIABLES; LINKING;
D O I
10.1890/13-0196.1
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Assessing trait responses to environmental gradients requires the simultaneous analysis of the information contained in three tables: L (species distribution across samples), R (environmental characteristics of samples), and Q (species traits). Among the available methods, the so-called fourth-corner and RLQ methods are two appealing alternatives that provide a direct way to test and estimate trait-environment relationships. Both methods are based on the analysis of the fourth-corner matrix, which crosses traits and environmental variables weighted by species abundances. However, they differ greatly in their outputs: RLQ is a multivariate technique that provides ordination scores to summarize the joint structure among the three tables, whereas the fourth-corner method mainly tests for individual trait-environment relationships (i.e., one trait and one environmental variable at a time). Here, we illustrate how the complementarity between these two methods can be exploited to promote new ecological knowledge and to improve the study of trait-environment relationships. After a short description of each method, we apply them to real ecological data to present their different outputs and provide hints about the gain resulting from their combined use.
引用
收藏
页码:14 / 21
页数:8
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