Novel RNA regulatory mechanisms revealed in the epitranscriptome

被引:33
作者
Saletore, Yogesh [1 ,2 ,3 ]
Chen-Kiang, Selina [4 ]
Mason, Christopher E. [1 ,2 ]
机构
[1] Weill Cornell Med Coll, Dept Physiol & Biophys, New York, NY USA
[2] Weill Cornell Med Coll, HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsau, New York, NY USA
[3] Triinst Training Program Computat Biol & Med, New York, NY USA
[4] Weill Cornell Med Coll, Dept Pathol, New York, NY USA
关键词
RNA modifications; m(6)A; N6-methyladenosine; methyladenosine; epigenetics; epigenomics; epitranscriptome; ARABIDOPSIS MESSENGER-RNA; FTO GENE; NUCLEAR-RNA; OBESITY; METHYLATION; MOUSE; N6-METHYLADENOSINE; DEMETHYLASE; SUBSTRATE; INTERACTS;
D O I
10.4161/rna.23812
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
M ethyl-6-adenosine (m(6)A) has been hypothesized to exist since the 1970s,(1) but little has been known about the specific RNAs, or sites within them, that are affected by this RNA modification. Here, we report that recent work has shown RNA modifications like m(6)A, collectively called the "epitranscriptome," are a pervasive feature of mammalian cells and likely play a role in development and disease. An enrichment of m(6)A near the last CDS of thousands of genes has implicated m(6)A in transcript processing, translational regulation and potentially a mechanism for regulating miRNA maturation. Also, because the sites of m(6)A show strong evolutionary conservation and have been replicated in nearly identical sites between mouse and human, strong evolutionary pressures are likely being maintained for this mark. 2,3 Finally, we note that m(6)A is one of over 100 modifications of RNA that have been reported,(4) and with the combination of high-throughput, next-generation sequencing (NGS) techniques, immuno-precipitation with appropriate antibodies and splicing-aware peak-finding, the dynamics of the epitranscriptome can now be mapped and characterized to discern their specific cellular roles.
引用
收藏
页码:342 / 346
页数:5
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