IMMUNOGLOBULIN-BINDING DOMAIN;
FORCE SPECTROSCOPY REVEALS;
SINGLE PROTEIN;
DYNAMICS SIMULATIONS;
ELASTOMERIC PROTEIN;
METAL CHELATION;
STABILITY;
TITIN;
POLYPROTEINS;
ELASTICITY;
D O I:
10.1016/j.bpj.2012.10.035
中图分类号:
Q6 [生物物理学];
学科分类号:
071011 ;
摘要:
Mechanical responses of elastic proteins are crucial for their biological function and nanotechnological use. Loading direction has been identified as one key determinant for the mechanical responses of proteins. However, it is not clear how a change in pulling direction changes the mechanical unfolding mechanism of the protein. Here, we combine protein engineering, single-molecule force spectroscopy, and steered molecular dynamics simulations to systematically investigate the mechanical response of a small globular protein GB1. Force versus extension profiles from both experiments and simulations reveal marked mechanical anisotropy of GB1. Using native contact analysis, we relate the mechanically robust shearing geometry with concurrent rupture of native contacts. This clearly contrasts the sequential rupture observed in simulations for the mechanically labile peeling geometry. Moreover, we identify multiple distinct mechanical unfolding pathways in two loading directions. Implications of such diverse unfolding mechanisms are discussed. Our results may also provide some insights for designing elastomeric proteins with tailored mechanical properties.
机构:
Yanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R ChinaYanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R China
Su, Ji-Guo
Zhao, Shu-Xin
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h-index: 0
机构:
Yanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R ChinaYanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R China
Zhao, Shu-Xin
Wang, Xiao-Feng
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h-index: 0
机构:
Chinese Acad Sci, Inst High Energy Phys, CAS Key Lab Biomed Effects Nanomat & Nanosafety, Beijing 100049, Peoples R ChinaYanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R China
Wang, Xiao-Feng
Li, Chun-Hua
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机构:
Beijing Univ Technol, Coll Life Sci & Bioengn, Beijing 100024, Peoples R ChinaYanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R China
Li, Chun-Hua
Li, Jing-Yuan
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h-index: 0
机构:
Chinese Acad Sci, Inst High Energy Phys, CAS Key Lab Biomed Effects Nanomat & Nanosafety, Beijing 100049, Peoples R ChinaYanshan Univ, Coll Sci, Qinhuangdao 066004, Peoples R China
机构:
Univ Pittsburgh, Dept Chem, Pittsburgh, PA USAUniv Pittsburgh, Dept Chem, Pittsburgh, PA USA
Heath, Shelby L.
Guseman, Alex J.
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机构:
Univ Pittsburgh, Sch Med, Dept Struct Biol, Pittsburgh, PA USAUniv Pittsburgh, Dept Chem, Pittsburgh, PA USA
Guseman, Alex J.
Gronenborn, Angela M.
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h-index: 0
机构:
Univ Pittsburgh, Dept Chem, Pittsburgh, PA USA
Univ Pittsburgh, Sch Med, Dept Struct Biol, Pittsburgh, PA USA
Univ Pittsburgh, Dept Chem, Pittsburgh, PA 15260 USAUniv Pittsburgh, Dept Chem, Pittsburgh, PA USA
Gronenborn, Angela M.
Horne, W. Seth
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机构:
Univ Pittsburgh, Dept Chem, Pittsburgh, PA USA
Univ Pittsburgh, Dept Chem, Pittsburgh, PA 15260 USAUniv Pittsburgh, Dept Chem, Pittsburgh, PA USA