Fine mapping a major obesity locus (jObes1) using a Berlin Fat Mouse x B6N advanced intercross population

被引:12
作者
Arends, D. [1 ]
Heise, S. [1 ]
Kaerst, S. [1 ]
Trost, J. [1 ]
Brockmann, G. A. [1 ]
机构
[1] Humboldt Univ, Albrecht Daniel Thaer Inst Agrar & Gartenbauwisse, Dept Crop & Anim Sci, Invalidenstr 42, D-10115 Berlin, Germany
关键词
BARDET-BIEDL-SYNDROME; INBRED LINE; MICE; PROTEIN; BBS7;
D O I
10.1038/ijo.2016.150
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
BACKGROUND/OBJECTIVES: The Berlin Fat Mouse Inbred line 860 is a model for juvenile obesity. Previously, a recessive major effect locus (jObes1) on chromosome 3 between 34 and 44 Mb has been found to be responsible for 39% of the variance of total fat mass at 10 weeks in a (BFMI860 x C57BL/6NCrl) F-2 population. The aim of this study was fine mapping of the jObes1 locus. SUBJECTS/METHODS: An advanced intercross line (AIL) was generated from the initial F2 mapping population. Three hundred and forty-four male mice of generation 28 were excessively phenotyped and genotyped using the MegaMuga mouse chip containing 22 164 informative single-nucleotide polymorphisms. Expression of candidate genes was investigated in gonadal adipose tissue, liver and whole brain from mice of different genotype classes. Classical genetic complementation tests were performed to test candidate genes. RESULTS: The high mapping resolution of the AIL reduced the confidence interval for jObes1 from 10 to 0.37 Mb between 36.48 and 36.85 Mb. This region was highly significantly (logarithm (base 10) of odds (LOD) score after Benjamini and Hochberg correction (LOD(BH)) > 50) associated with total fat mass starting at puberty (6 weeks). Male homozygous carriers of the jObese1 BFMI allele had 3 g more fat than the other genotypes. Surprisingly, this genotype class showed lower body mass until weaning at 3 weeks (LOD(BH) = 3.2). The mapped interval contains four genes. Bbs7, the most likely candidate gene that also caused obesity in the complementation test was differentially expressed in all tissues examined, whereas the neighboring cyclin A2 (Ccna2) gene showed differential expression in gonadal adipose tissue. CONCLUSIONS: Using an AIL, the confidence interval for jObes1 could be 27-fold reduced by finding chromosomal recombinations. Although Bbs7 is the most likely obesity gene in the jObes1 region, neighboring genes cannot be entirely excluded. Further examinations are needed to enlighten the mechanism leading to physiological consequences on body mass and fat mass in juvenile animals.
引用
收藏
页码:1784 / 1788
页数:5
相关论文
共 23 条
[1]   R/qtl: high-throughput multiple QTL mapping [J].
Arends, Danny ;
Prins, Pjotr ;
Jansen, Ritsert C. ;
Broman, Karl W. .
BIOINFORMATICS, 2010, 26 (23) :2990-2992
[2]   Determination of the differentially expressed genes in microarray experiments using local FDR [J].
Aubert, J ;
Bar-Hen, A ;
Daudin, JJ ;
Robin, S .
BMC BIOINFORMATICS, 2004, 5 (1)
[3]   Identification of a novel Bardet-Biedl syndrome protein, BBS7, that shares structural features with BBS1 and BBS2 [J].
Badano, JL ;
Ansley, SJ ;
Leitch, CC ;
Lewis, RA ;
Lupski, JR ;
Katsanis, N .
AMERICAN JOURNAL OF HUMAN GENETICS, 2003, 72 (03) :650-658
[4]   BLAST plus : architecture and applications [J].
Camacho, Christiam ;
Coulouris, George ;
Avagyan, Vahram ;
Ma, Ning ;
Papadopoulos, Jason ;
Bealer, Kevin ;
Madden, Thomas L. .
BMC BIOINFORMATICS, 2009, 10
[5]   Estimation of significance thresholds for genomewide association scans [J].
Dudbridge, Frank ;
Gusnanto, Arief .
GENETIC EPIDEMIOLOGY, 2008, 32 (03) :227-234
[6]  
Dupuis J, 1999, GENETICS, V151, P373
[7]   Bardet-Biedl syndrome [J].
Forsythe, Elizabeth ;
Beales, Philip L. .
EUROPEAN JOURNAL OF HUMAN GENETICS, 2013, 21 (01) :8-13
[8]   Features of the Metabolic Syndrome in the Berlin Fat Mouse as a Model for Human Obesity [J].
Hantschel, Claudia ;
Wagener, Asja ;
Neuschl, Christina ;
Teupser, Daniel ;
Brockmann, Gudrun A. .
OBESITY FACTS, 2011, 4 (04) :270-277
[9]   TRPC3 channels are required for synaptic transmission and motor coordination [J].
Hartmann, Jana ;
Dragicevic, Elena ;
Adelsberger, Helmuth ;
Henning, Horst A. ;
Sumser, Martin ;
Abramowitz, Joel ;
Blum, Robert ;
Dietrich, Alexander ;
Freichel, Marc ;
Flockerzi, Veit ;
Birnbaumer, Lutz ;
Konnerth, Arthur .
NEURON, 2008, 59 (03) :392-398
[10]   Cyclins and cell cycle checkpoints [J].
Johnson, DG ;
Walker, CL .
ANNUAL REVIEW OF PHARMACOLOGY AND TOXICOLOGY, 1999, 39 :295-312