DNA Barcoding and Species Boundary Delimitation of Selected Species of Chinese Acridoidea (Orthoptera: Caelifera)

被引:61
作者
Huang, Jianhua [1 ,2 ]
Zhang, Aibing [3 ]
Mao, Shaoli [1 ]
Huang, Yuan [1 ]
机构
[1] Shaanxi Normal Univ, Coll Life Sci, Xian, Peoples R China
[2] Guangxi Normal Univ, Coll Life Sci, Guilin, Peoples R China
[3] Capital Normal Univ, Coll Life Sci, Beijing, Peoples R China
基金
中国国家自然科学基金; 中国博士后科学基金;
关键词
MOLECULAR PHYLOGENETIC ANALYSIS; MITOCHONDRIAL CYTOCHROME-B; NEIGHBOR-JOINING METHOD; OXIDASE SUBUNIT-I; GRASSHOPPERS ORTHOPTERA; COLOR PATTERN; TAXONOMY; IDENTIFICATION; SEQUENCES; EVOLUTION;
D O I
10.1371/journal.pone.0082400
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We tested the performance of DNA barcoding in Acridoidea and attempted to solve species boundary delimitation problems in selected groups using COI barcodes. Three analysis methods were applied to reconstruct the phylogeny. K2P distances were used to assess the overlap range between intraspecific variation and interspecific divergence. "Best match (BM)", "best close match (BCM)", all species barcodes (ASB)" and "back-propagation neural networks (BP-based method)" were utilized to test he success rate of species identification. Phylogenetic species concept and network analysis were employed to delimitate the species boundary in eight selected species groups. The results demonstrated that the COI barcode region performed better in phylogenetic reconstruction at genus and species levels than at hi her-levels, but showed a little improvement in resolving the higher-level relationships when the third base data or both first and third base data were excluded. Most overlaps and incorrect identifications may be due to imperfect taxonomy, indicating the critical role of taxonomic revision in DNA barcoding study. Species boundary delimitation confirmed the presence of oversplitting in six species groups and suggested that each group should be treated as a single species
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页数:17
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