Identification of the ER-resident E3 ubiquitin ligase RNF145 as a novel LXR-regulated gene

被引:24
作者
Cook, Emma C. L. [1 ]
Nelson, Jessica K. [1 ]
Sorrentino, Vincenzo [1 ,2 ]
Koenis, Duco [1 ]
Moeton, Martina [1 ]
Scheij, Saskia [1 ]
Ottenhoff, Roelof [1 ]
Bleijlevens, Boris [1 ]
Loregger, Anke [1 ]
Zelcer, Noam [1 ]
机构
[1] Univ Amsterdam, Acad Med Ctr, Dept Med Biochem, Meibergdreef 9, Amsterdam, Netherlands
[2] Ecole Polytech Fed Lausanne, Lab Integrat & Syst Physiol, Lausanne, Switzerland
来源
PLOS ONE | 2017年 / 12卷 / 02期
基金
欧洲研究理事会;
关键词
LIVER-X-RECEPTOR; STEROL-SENSING DOMAIN; HMG COA REDUCTASE; ELEMENT-BINDING PROTEIN-1C; LIPID-METABOLISM; TRANSCRIPTION FACTORS; CHOLESTEROL EFFLUX; HUMAN MACROPHAGES; DEGRADATION; ALPHA;
D O I
10.1371/journal.pone.0172721
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cellular cholesterol metabolism is subject to tight regulation to maintain adequate levels of this central lipid molecule. Herein, the sterol-responsive Liver X Receptors (LXRs) play an important role owing to their ability to reduce cellular cholesterol load. In this context, identifying the full set of LXR-regulated genes will contribute to our understanding of their role in cholesterol metabolism. Using global transcriptional analysis we report here the identification of RNF145 as an LXR-regulated target gene. We demonstrate that RNF145 is regulated by LXRs in both human and mouse primary cells and cell lines, and in vivo in mice. Regulation of RNF145 by LXR depends on a functional LXR-element in its proximal promotor. Consistent with LXR-dependent regulation of Rnf145 we show that regulation is lost in macrophages and fibroblasts from Lxr alpha beta((-/-)) mice, and also in vivo in livers of Lxr alpha((-/-)) mice treated with the LXR synthetic ligand T0901317. RNF145 is closely related to RNF139/TRC8, an E3 ligase implicated in control of SREBP processing. However, silencing of RNF145 in HepG2 or HeLa cells does not impair SREBP1/2 processing and sterol-responsive gene expression in these cells. Similar to TRC8, we demonstrate that RNF145 is localized to the ER and that it possesses intrinsic E3 ubiquitin ligase activity. In summary, we report the identification of RNF145 as an ER-resident E3 ubiquitin ligase that is transcriptionally controlled by LXR.
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页数:18
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共 55 条
[1]   Functional coordination and HuR-mediated regulation of mRNA stability during T cell activation [J].
Blackinton, Jeff G. ;
Keene, Jack D. .
NUCLEIC ACIDS RESEARCH, 2016, 44 (01) :426-436
[2]   Genome-Wide Profiling of Liver X Receptor, Retinoid X Receptor, and Peroxisome Proliferator-Activated Receptor α in Mouse Liver Reveals Extensive Sharing of Binding Sites [J].
Boergesen, Michael ;
Pedersen, Thomas Askov ;
Gross, Barbara ;
van Heeringen, Simon J. ;
Hagenbeek, Dik ;
Bindesboll, Christian ;
Caron, Sandrine ;
Lalloyer, Fanny ;
Steffensen, Knut R. ;
Nebb, Hilde I. ;
Gustafsson, Jan-Ake ;
Stunnenberg, Hendrik G. ;
Staels, Bart ;
Mandrup, Susanne .
MOLECULAR AND CELLULAR BIOLOGY, 2012, 32 (04) :852-867
[3]   A PPARγ-LXR-ABCA1 pathway in macrophages is involved in cholesterol efflux and atherogenesis [J].
Chawla, A ;
Boisvert, WA ;
Lee, CH ;
Laffitte, BA ;
Barak, Y ;
Joseph, SB ;
Liao, D ;
Nagy, L ;
Edwards, PA ;
Curtiss, LK ;
Evans, RM ;
Tontonoz, P .
MOLECULAR CELL, 2001, 7 (01) :161-171
[4]   Epigenome-wide association study (EWAS) of BMI, BMI change and waist circumference in African American adults identifies multiple replicated loci [J].
Demerath, Ellen W. ;
Guan, Weihua ;
Grove, Megan L. ;
Aslibekyan, Stella ;
Mendelson, Michael ;
Zhou, Yi-Hui ;
Hedman, Asa K. ;
Sandling, Johanna K. ;
Li, Li-An ;
Irvin, Marguerite R. ;
Zhi, Degui ;
Deloukas, Panos ;
Liang, Liming ;
Liu, Chunyu ;
Bressler, Jan ;
Spector, Tim D. ;
North, Kari ;
Li, Yun ;
Absher, Devin M. ;
Levy, Daniel ;
Arnett, Donna K. ;
Fornage, Myriam ;
Pankow, James S. ;
Boerwinkle, Eric .
HUMAN MOLECULAR GENETICS, 2015, 24 (15) :4464-4479
[5]   RING Domain E3 Ubiquitin Ligases [J].
Deshaies, Raymond J. ;
Joazeiro, Claudio A. P. .
ANNUAL REVIEW OF BIOCHEMISTRY, 2009, 78 :399-434
[6]   CCTOP: a Consensus Constrained TOPology prediction web server [J].
Dobson, Laszlo ;
Remenyi, Istvan ;
Tusnady, Gabor E. .
NUCLEIC ACIDS RESEARCH, 2015, 43 (W1) :W408-W412
[7]   ChIP-seq profiling of the active chromatin marker H3K4me3 and PPAR gamma, CEBP alpha and LXR target genes in human SGBS adipocytes [J].
Galhardo, Mafalda ;
Sinkkonen, Lasse ;
Berninger, Philipp ;
Lin, Jake ;
Sauter, Thomas ;
Heinaniemi, Merja .
GENOMICS DATA, 2014, 2 :230-236
[8]   Protein sensors for membrane sterols [J].
Goldstein, JL ;
DeBose-Boyd, RA ;
Brown, MS .
CELL, 2006, 124 (01) :35-46
[9]   Functional genomics identifies negative regulatory nodes controlling phagocyte oxidative burst [J].
Graham, Daniel B. ;
Becker, Christine E. ;
Doan, Aivi ;
Goel, Gautam ;
Villablanca, Eduardo J. ;
Knights, Dan ;
Mok, Amanda ;
Ng, Aylwin C. Y. ;
Doench, John G. ;
Root, David E. ;
Clish, Clary B. ;
Xavier, Ramnik J. .
NATURE COMMUNICATIONS, 2015, 6
[10]   Distinct roles of insulin and liver X receptor in the induction and cleavage of sterol regulatory element-binding protein-1c [J].
Hegarty, BD ;
Bobard, A ;
Hainault, I ;
Ferré, P ;
Bossard, P ;
Foufelle, F .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (03) :791-796