Comparative Ocular Microbial Communities in Humans with and without Blepharitis

被引:130
作者
Lee, Se Hee [1 ]
Oh, Doo Hwan [2 ]
Jung, Ji Young [1 ]
Kim, Jae Chan [2 ]
Jeon, Che Ok [1 ]
机构
[1] Chung Ang Univ, Sch Biol Sci, Res Ctr Biomol & Biosyst, Seoul 156756, South Korea
[2] Chung Ang Univ, Coll Med, Dept Ophthalmol, Seoul 156756, South Korea
基金
新加坡国家研究基金会;
关键词
DEMODEX-FOLLICULORUM; ROSACEA; FLORA; DIVERSITY; DATABASE; MITES;
D O I
10.1167/iovs.12-9922
中图分类号
R77 [眼科学];
学科分类号
100212 ;
摘要
PURPOSE. The aims of our study were to compare the ocular microbial communities of humans with and without blepharitis in an attempt to elucidate which microorganisms may cause blepharitis. METHODS. Bacterial 16S rRNA genes of eyelash and tear samples from seven blepharitis patients and four healthy controls were sequenced using a pyrosequencing method, and their bacterial community structures were compared bioinformatically. RESULTS. Phylotypic analysis demonstrated that eyelash and tear samples had highly diverse bacterial communities with many previously undescribed bacteria. Bacterial communities in eyelash samples from subjects with blepharitis were less diverse than those from healthy controls, while the bacterial communities of tear subjects with blepharitis were more diverse than those of healthy subjects. Statistical analyses using UniFrac and a principle coordinate analysis showed that the bacterial communities of tear samples from subjects with blepharitis were well clustered, regardless of individual, while the bacterial communities of all eyelash samples and healthy tear samples were not well clustered due to high interpersonal variability. Bioinformatic analysis revealed that Propionibacterium, Staphylococcus, Streptophyta, Corynebacterium, and Enhydrobacter were the common ocular bacteria. An increase of Staphylococcus, Streptophyta, Corynebacterium, and Enhydrobacter, and a decrease of Propionibacterium were observed from blepharitis subjects, in terms of the relative abundances. CONCLUSIONS. Higher abundances of Streptophyta, Corynebacterium, and Enhydrobacter in blepharitis subjects suggested that human blepharitis might be induced by the infestations of pollens, dusts, and soil particles. These results will provide valuable information for the prevention and treatment of human blepharitis based on ocular microbial flora. (Invest Ophthalmol Vis Sci. 2012;53:5585-5593) DOI:10.1167/iovs.12-9922
引用
收藏
页码:5585 / 5593
页数:9
相关论文
共 44 条
[1]  
[Anonymous], 1963, The Mathematical Theory of Communication
[2]   Demodex folliculorum in development of dermatitis rosaceiformis steroidica and rosacea-related diseases [J].
Basta-Juzbasic, A ;
Subic, JS ;
Ljubojevic, S .
CLINICS IN DERMATOLOGY, 2002, 20 (02) :135-140
[3]   ESTIMATING THE POPULATION-SIZE FOR CAPTURE RECAPTURE DATA WITH UNEQUAL CATCHABILITY [J].
CHAO, A .
BIOMETRICS, 1987, 43 (04) :783-791
[4]   Skin microbiota: a source of disease or defence? [J].
Cogen, A. L. ;
Nizet, V. ;
Gallo, R. L. .
BRITISH JOURNAL OF DERMATOLOGY, 2008, 158 (03) :442-455
[5]   The Ribosomal Database Project: improved alignments and new tools for rRNA analysis [J].
Cole, J. R. ;
Wang, Q. ;
Cardenas, E. ;
Fish, J. ;
Chai, B. ;
Farris, R. J. ;
Kulam-Syed-Mohideen, A. S. ;
McGarrell, D. M. ;
Marsh, T. ;
Garrity, G. M. ;
Tiedje, J. M. .
NUCLEIC ACIDS RESEARCH, 2009, 37 :D141-D145
[6]   Bacterial Community Variation in Human Body Habitats Across Space and Time [J].
Costello, Elizabeth K. ;
Lauber, Christian L. ;
Hamady, Micah ;
Fierer, Noah ;
Gordon, Jeffrey I. ;
Knight, Rob .
SCIENCE, 2009, 326 (5960) :1694-1697
[7]   NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes [J].
DeSantis, T. Z. ;
Hugenholtz, P. ;
Keller, K. ;
Brodie, E. L. ;
Larsen, N. ;
Piceno, Y. M. ;
Phan, R. ;
Andersen, G. L. .
NUCLEIC ACIDS RESEARCH, 2006, 34 :W394-W399
[8]   Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB [J].
DeSantis, T. Z. ;
Hugenholtz, P. ;
Larsen, N. ;
Rojas, M. ;
Brodie, E. L. ;
Keller, K. ;
Huber, T. ;
Dalevi, D. ;
Hu, P. ;
Andersen, G. L. .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (07) :5069-5072
[9]   Diversity of Bacteria at Healthy Human Conjunctiva [J].
Dong, Qunfeng ;
Brulc, Jennifer M. ;
Iovieno, Alfonso ;
Bates, Brandon ;
Garoutte, Aaron ;
Miller, Darlene ;
Revanna, Kashi V. ;
Gao, Xiang ;
Antonopoulos, Dionysios A. ;
Slepak, Vladlen Z. ;
Shestopalov, Valery I. .
INVESTIGATIVE OPHTHALMOLOGY & VISUAL SCIENCE, 2011, 52 (08) :5408-5413
[10]   COMPARATIVE BACTERIOLOGY OF CHRONIC BLEPHARITIS [J].
DOUGHERTY, JM ;
MCCULLEY, JP .
BRITISH JOURNAL OF OPHTHALMOLOGY, 1984, 68 (08) :524-528