Origin of a Subgenome and Genome Evolution of Allotetraploid Cotton Species

被引:15
作者
He, Peng [1 ]
Zhang, Yuzhou [2 ]
Xiao, Guanghui [1 ]
机构
[1] Shaanxi Normal Univ, Coll Life Sci, Xian 710119, Peoples R China
[2] IST Austria, A-3400 Klosterneuburg, Austria
关键词
D O I
10.1016/j.molp.2020.07.006
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1238 / 1240
页数:3
相关论文
共 11 条
  • [1] Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement
    Chen, Z. Jeffrey
    Sreedasyam, Avinash
    Ando, Atsumi
    Song, Qingxin
    De Santiago, Luis M.
    Hulse-Kemp, Amanda M.
    Ding, Mingquan
    Ye, Wenxue
    Kirkbride, Ryan C.
    Jenkins, Jerry
    Plott, Christopher
    Lovell, John
    Lin, Yu-Ming
    Vaughn, Robert
    Liu, Bo
    Simpson, Sheron
    Scheffler, Brian E.
    Wen, Li
    Saski, Christopher A.
    Grover, Corrinne E.
    Hu, Guanjing
    Conover, Justin L.
    Carlson, Joseph W.
    Shu, Shengqiang
    Boston, Lori B.
    Williams, Melissa
    Peterson, Daniel G.
    McGee, Keith
    Jones, Don C.
    Wendel, Jonathan F.
    Stelly, David M.
    Grimwood, Jane
    Schmutz, Jeremy
    [J]. NATURE GENETICS, 2020, 52 (05) : 525 - +
  • [2] Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits
    Fang, Lei
    Wang, Qiong
    Hu, Yan
    Jia, Yinhua
    Chen, Jiedan
    Liu, Bingliang
    Zhang, Zhiyuan
    Guan, Xueying
    Chen, Shuqi
    Zhou, Baoliang
    Mei, Gaofu
    Sun, Junling
    Pan, Zhaoe
    He, Shoupu
    Xiao, Songhua
    Shi, Weijun
    Gong, Wenfang
    Liu, Jianguang
    Ma, Jun
    Cai, Caiping
    Zhu, Xiefei
    Guo, Wangzhen
    Du, Xiongming
    Zhang, Tianzhen
    [J]. NATURE GENETICS, 2017, 49 (07) : 1089 - +
  • [3] A New Species of Cotton from Wake Atoll, Gossypium stephensii (Malvaceae)
    Gallagher, Joseph P.
    Grover, Corrinne E.
    Rex, Kristen
    Moran, Matthew
    Wendel, Jonathan F.
    [J]. SYSTEMATIC BOTANY, 2017, 42 (01) : 115 - 123
  • [4] Polyploidy and small RNA regulation of cotton fiber development
    Guan, Xueying
    Song, Qingxin
    Chen, Z. Jeffrey
    [J]. TRENDS IN PLANT SCIENCE, 2014, 19 (08) : 516 - 528
  • [5] Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
    Hu, Yan
    Chen, Jiedan
    Fang, Lei
    Zhang, Zhiyuan
    Ma, Wei
    Niu, Yongchao
    Ju, Longzhen
    Deng, Jieqiong
    Zhao, Ting
    Lian, Jinmin
    Baruch, Kobi
    Fang, David
    Liu, Xia
    Ruan, Yong-ling
    Rahman, Mehboob-ur
    Han, Jinlei
    Wang, Kai
    Wang, Qiong
    Wu, Huaitong
    Mei, Gaofu
    Zang, Yihao
    Han, Zegang
    Xu, Chenyu
    Shen, Weijuan
    Yang, Duofeng
    Si, Zhanfeng
    Dai, Fan
    Zou, Liangfeng
    Huang, Fei
    Bai, Yulin
    Zhang, Yugao
    Brodt, Avital
    Ben-Hamo, Hilla
    Zhu, Xiefei
    Zhou, Baoliang
    Guan, Xueying
    Zhu, Shuijin
    Chen, Xiaoya
    Zhang, Tianzhen
    [J]. NATURE GENETICS, 2019, 51 (04) : 739 - +
  • [6] Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution
    Huang, Gai
    Wu, Zhiguo
    Percy, Richard G.
    Bai, Mingzhou
    Li, Yang
    Frelichowski, James E.
    Hu, Jiang
    Wang, Kun
    Yu, John Z.
    Zhu, Yuxian
    [J]. NATURE GENETICS, 2020, 52 (05) : 516 - +
  • [7] Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
    Li, Fuguang
    Fan, Guangyi
    Lu, Cairui
    Xiao, Guanghui
    Zou, Changsong
    Kohel, Russell J.
    Ma, Zhiying
    Shang, Haihong
    Ma, Xiongfeng
    Wu, Jianyong
    Liang, Xinming
    Huang, Gai
    Percy, Richard G.
    Liu, Kun
    Yang, Weihua
    Chen, Wenbin
    Du, Xiongming
    Shi, Chengcheng
    Yuan, Youlu
    Ye, Wuwei
    Liu, Xin
    Zhang, Xueyan
    Liu, Weiqing
    Wei, Hengling
    Wei, Shoujun
    Huang, Guodong
    Zhang, Xianlong
    Zhu, Shuijin
    Zhang, He
    Sun, Fengming
    Wang, Xingfen
    Liang, Jie
    Wang, Jiahao
    He, Qiang
    Huang, Leihuan
    Wang, Jun
    Cui, Jinjie
    Song, Guoli
    Wang, Kunbo
    Xu, Xun
    Yu, John Z.
    Zhu, Yuxian
    Yu, Shuxun
    [J]. NATURE BIOTECHNOLOGY, 2015, 33 (05) : 524 - U242
  • [8] Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres
    Paterson, Andrew H.
    Wendel, Jonathan F.
    Gundlach, Heidrun
    Guo, Hui
    Jenkins, Jerry
    Jin, Dianchuan
    Llewellyn, Danny
    Showmaker, Kurtis C.
    Shu, Shengqiang
    Udall, Joshua
    Yoo, Mi-jeong
    Byers, Robert
    Chen, Wei
    Doron-Faigenboim, Adi
    Duke, Mary V.
    Gong, Lei
    Grimwood, Jane
    Grover, Corrinne
    Grupp, Kara
    Hu, Guanjing
    Lee, Tae-ho
    Li, Jingping
    Lin, Lifeng
    Liu, Tao
    Marler, Barry S.
    Page, Justin T.
    Roberts, Alison W.
    Romanel, Elisson
    Sanders, William S.
    Szadkowski, Emmanuel
    Tan, Xu
    Tang, Haibao
    Xu, Chunming
    Wang, Jinpeng
    Wang, Zining
    Zhang, Dong
    Zhang, Lan
    Ashrafi, Hamid
    Bedon, Frank
    Bowers, John E.
    Brubaker, Curt L.
    Chee, Peng W.
    Das, Sayan
    Gingle, Alan R.
    Haigler, Candace H.
    Harker, David
    Hoffmann, Lucia V.
    Hovav, Ran
    Jones, Donald C.
    Lemke, Cornelia
    [J]. NATURE, 2012, 492 (7429) : 423 - +
  • [9] Multi-strategic RNA-seq analysis reveals a high-resolution transcriptional landscape in cotton
    Wang, Kun
    Wang, Dehe
    Zheng, Xiaomin
    Qin, Ai
    Zhou, Jie
    Guo, Boyu
    Chen, Yanjun
    Wen, Xingpeng
    Ye, Wen
    Zhou, Yu
    Zhu, Yuxian
    [J]. NATURE COMMUNICATIONS, 2019, 10 (1)
  • [10] Wendel J.F., 2012, Polyploidy and Genome Evolution, P181, DOI [10.1007/978-3-642-31442-110, DOI 10.1007/978-3-642-31442-1_10, DOI 10.1007/978-3-642-31442-110]