Conformational Change of F1-ATPase ε Subunit upon ATP Binding Studied by Molecular Dynamics Simulations and Small-angle X-ray Scattering

被引:0
|
作者
Oroguchi, Tomotaka [1 ]
Kato-Yamada, Yasuyuki [2 ]
Hashimoto, Hiroshi [1 ]
Unzai, Satoru [1 ]
Sato, Mamoru [1 ]
Ikeguchi, Mitsunori [1 ]
机构
[1] Yokohama City Univ, Int Grad Sch Arts & Sci, Yokohama, Kanagawa, Japan
[2] Rikkyo Univ, Dept Life Sci, Tokyo, Japan
关键词
D O I
10.1016/j.bpj.2008.12.1487
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
1523-Pos
引用
收藏
页码:299A / 299A
页数:1
相关论文
共 50 条
  • [21] Mesoscopic Structures of Triglyceride Nanosuspensions Studied by Small-Angle X-ray and Neutron Scattering and Computer Simulations
    Schmiele, Martin
    Schindler, Torben
    Westermann, Martin
    Steiniger, Frank
    Radulescu, Aurel
    Kriele, Armin
    Gilles, Ralph
    Unruh, Tobias
    JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 118 (29): : 8808 - 8818
  • [22] Stepwise Propagation of the ATP-induced Conformational Change of the F1-ATPase β Subunit Revealed by NMR
    Yagi, Hiromasa
    Kajiwara, Nobumoto
    Iwabuchi, Tomoyuki
    Izumi, Kenya
    Yoshida, Masasuke
    Akutsu, Hideo
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2009, 284 (04) : 2374 - 2382
  • [23] Hybrid Methods for Modeling Protein Structures Using Molecular Dynamics Simulations and Small-Angle X-Ray Scattering Data
    Ekimoto, Toru
    Ikeguchi, Mitsunori
    INTEGRATIVE STRUCTURAL BIOLOGY WITH HYBRID METHODS, 2018, 1105 : 237 - 258
  • [24] Extracting time series matching a small-angle X-ray scattering profile from trajectories of molecular dynamics simulations
    Shimizu, Masahiro
    Okuda, Aya
    Morishima, Ken
    Inoue, Rintaro
    Sato, Nobuhiro
    Yunoki, Yasuhiro
    Urade, Reiko
    Sugiyama, Masaaki
    SCIENTIFIC REPORTS, 2022, 12 (01):
  • [25] Molecular Dynamics Simulations Combined with Nuclear Magnetic Resonance and/or Small-Angle X-ray Scattering Data for Characterizing Intrinsically Disordered Protein Conformational Ensembles
    Chan-Yao-Chong, Maud
    Durand, Dominique
    Ha-Duong, Tap
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2019, 59 (05) : 1743 - 1758
  • [26] Conformational states of Zika virus non-structural protein 3 determined by molecular dynamics simulations with small-angle X-Ray scattering data
    Zhu, Guanhua
    Pan, Ankita
    Gruber, Gerhard
    Lu, Lanyuan
    PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 2019, 143 : 13 - 19
  • [27] Extracting time series matching a small-angle X-ray scattering profile from trajectories of molecular dynamics simulations
    Masahiro Shimizu
    Aya Okuda
    Ken Morishima
    Rintaro Inoue
    Nobuhiro Sato
    Yasuhiro Yunoki
    Reiko Urade
    Masaaki Sugiyama
    Scientific Reports, 12 (1)
  • [28] Conformational characterization of DnaK and its complexes by small-angle X-ray scattering
    Shi, L
    Kataoka, M
    Fink, AL
    BIOCHEMISTRY, 1996, 35 (10) : 3297 - 3308
  • [29] A High-Throughput Small-Angle X-ray Scattering Assay to Determine the Conformational Change of Plasminogen
    Quek, Adam J.
    Cowieson, Nathan P.
    Caradoc-Davies, Tom T.
    Conroy, Paul J.
    Whisstock, James C.
    Law, Ruby H. P.
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2023, 24 (18)
  • [30] Conformational differences between Azotobacter vinelandii nitrogenase MoFe proteins as studied by small-angle X-ray scattering
    Corbett, Mary C.
    Hu, Yilin
    Fay, Aaron W.
    Tsuruta, Hiro
    Ribbe, Markus W.
    Hodgson, Keith O.
    Hedman, Britt
    BIOCHEMISTRY, 2007, 46 (27) : 8066 - 8074