The acute transcriptional response of the coral Acropora millepora to immune challenge: expression of GiMAP/IAN genes links the innate immune responses of corals with those of mammals and plants

被引:40
作者
Weiss, Yvonne [1 ,2 ]
Foret, Sylvain [1 ,3 ]
Hayward, David C. [3 ]
Ainsworth, Tracy [1 ,2 ]
King, Rob [4 ]
Ball, Eldon E. [3 ]
Miller, David J. [1 ,2 ]
机构
[1] James Cook Univ, ARC Ctr Excellence Coral Reef Studies, Townsville, Qld 4811, Australia
[2] James Cook Univ, Sch Pharm & Mol Sci, Townsville, Qld 4811, Australia
[3] Australian Natl Univ, Res Sch Biol, Canberra, ACT 0200, Australia
[4] GeneWorks Pty Ltd, Thebarton, SA 5031, Australia
基金
澳大利亚研究理事会;
关键词
Innate immunity; Evolution; GTPase; Coral disease; Cnidaria; Transcriptomics; SCLERACTINIAN CORAL; NUCLEOTIDE-SEQUENCE; FORMOSA CNIDARIA; FAMILY; RECOGNITION; ARABIDOPSIS; REVEALS; DISEASE; REPERTOIRE; ACTIVATION;
D O I
10.1186/1471-2164-14-400
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Background: As a step towards understanding coral immunity we present the first whole transcriptome analysis of the acute responses of Acropora millepora to challenge with the bacterial cell wall derivative MDP and the viral mimic poly I:C, defined immunogens provoking distinct but well characterised responses in higher animals. Results: These experiments reveal similarities with the responses both of arthropods and mammals, as well as coral-specific effects. The most surprising finding was that MDP specifically induced three members of the GiMAP gene family, which has been implicated in immunity in mammals but is absent from Drosophila and Caenorhabditis. Like their mammalian homologs, GiMAP genes are arranged in a tandem cluster in the coral genome. Conclusions: A phylogenomic survey of this gene family implies ancient origins, multiple independent losses and lineage-specific expansions during animal evolution. Whilst functional convergence cannot be ruled out, GiMAP expression in corals may reflect an ancestral role in immunity, perhaps in phagolysosomal processing.
引用
收藏
页数:12
相关论文
共 62 条
[61]   Gene ontology analysis for RNA-seq: accounting for selection bias [J].
Young, Matthew D. ;
Wakefield, Matthew J. ;
Smyth, Gordon K. ;
Oshlack, Alicia .
GENOME BIOLOGY, 2010, 11 (02)
[62]   Attenuation of cardiac dysfunction by HSPA12B in endotoxin-induced sepsis in mice through a PI3K-dependent mechanism [J].
Zhou, Hongmei ;
Qian, Jin ;
Li, Chuanfu ;
Li, Jingjin ;
Zhang, Xiaojin ;
Ding, Zhengnian ;
Gao, Xiang ;
Han, Zhihua ;
Cheng, Yunlin ;
Liu, Li .
CARDIOVASCULAR RESEARCH, 2011, 89 (01) :109-118