Hepatocellular carcinoma: Transcriptome diversity regulated by RNA editing

被引:16
作者
Li, Yan [1 ,2 ]
Chen, Leilei [3 ]
Chan, Tim Hon Man [3 ]
Guan, Xin-Yuan [1 ,2 ,4 ]
机构
[1] Univ Hong Kong, Dept Clin Oncol, Hong Kong, Hong Kong, Peoples R China
[2] Univ Hong Kong, State Key Lab Liver Res, Hong Kong, Hong Kong, Peoples R China
[3] Natl Univ Singapore, Canc Sci Inst Singapore, Singapore 117548, Singapore
[4] Sun Yat Sen Univ, Ctr Canc, State Key Lab Oncol Southern China, Guangzhou 510275, Guangdong, Peoples R China
关键词
HCC; A-to-I RNA editing; Transcriptome; AZIN1; ADARs; DOUBLE-STRANDED-RNA; HUMAN CANCER; ADAR1; REPLICATION; DEAMINASE; MIGRATION; SITES; BRAIN; FATE; GENE;
D O I
10.1016/j.biocel.2013.05.033
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Hepatocellular carcinoma (HCC) can be envisioned as a prolonged multi-stage process accumulating genetic and epigenetic changes. In the past years, DNA alterations lent us important clues to the comprehension of molecular pathways involved in HCC. However, as an increasing number of RNAs were identified to be subject to A-to-I modifications, it has become apparent that RNA editing might be the causal basis of various human diseases. Recent evidence has strengthened this notion by correlating hyper-edited AZIN1 (antizyme inhibitor 1) protein with HCC onset and the mechanisms that regulate cell transformation. As we continue to demystify it, RNA editing astonishes us with its diverse substrates, esoteric functions, elaborate machinery and complex interaction with HBV/HCV viral infection. In this review, we examine the contribution of A-to-I RNA editing to caner onset/progression and explore its potential implications for cancer treatment advances. (C) 2013 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1843 / 1848
页数:6
相关论文
共 30 条
[1]   Widespread A-to-I RNA editing of alu-containing mRNAs in the human transcriptome [J].
Athanasiadis, A ;
Rich, A ;
Maas, S .
PLOS BIOLOGY, 2004, 2 (12) :2144-2158
[2]   MAJOR TRANSCRIPT OF THE FRAMESHIFTED COXLL GENE FROM TRYPANOSOME MITOCHONDRIA CONTAINS 4 NUCLEOTIDES THAT ARE NOT ENCODED IN THE DNA [J].
BENNE, R ;
VANDENBURG, J ;
BRAKENHOFF, JPJ ;
SLOOF, P ;
VANBOOM, JH ;
TROMP, MC .
CELL, 1986, 46 (06) :819-826
[3]   RNA editing of human microRNAs [J].
Blow, Matthew J. ;
Grocock, Russell J. ;
van Dongen, Stijn ;
Enright, Anton J. ;
Dicks, Ed ;
Futreal, P. Andrew ;
Wooster, Richard ;
Stratton, Michael R. .
GENOME BIOLOGY, 2006, 7 (04)
[4]   Adenosine deamination in human transcripts generates novel microRNA binding sites [J].
Borchert, Glen M. ;
Gilmore, Brian L. ;
Spengler, Ryan M. ;
Xing, Yi ;
Lanier, William ;
Bhattacharya, Debashish ;
Davidson, Beverly L. .
HUMAN MOLECULAR GENETICS, 2009, 18 (24) :4801-4807
[5]   Primary liver cancer:: Worldwide incidence and trends [J].
Bosch, FX ;
Ribes, J ;
Díaz, M ;
Cléries, R .
GASTROENTEROLOGY, 2004, 127 (05) :S5-S16
[6]   Clinical management of hepatocellular carcinoma.: Conclusions of the Barcelona-2000 EASL Conference [J].
Bruix, J ;
Sherman, M ;
Llovet, JM ;
Beaugrand, M ;
Lencioni, R ;
Burroughs, AK ;
Christensen, E ;
Pagliaro, L ;
Colombo, M ;
Rodés, J .
JOURNAL OF HEPATOLOGY, 2001, 35 (03) :421-430
[7]   Regulation of serotonin-2C receptor G-protein coupling by RNA editing [J].
Burns, CM ;
Chu, H ;
Rueter, SM ;
Hutchinson, LK ;
Canton, H ;
SandersBush, E ;
Emeson, RB .
NATURE, 1997, 387 (6630) :303-308
[8]   Down-regulation of RNA editing in pediatric astrocytomas - ADAR2 editing activity inhibits cell migration and proliferation [J].
Cenci, Caterina ;
Barzotti, Rita ;
Galeano, Federica ;
Corbelli, Sandro ;
Rota, Rossella ;
Massimi, Luca ;
Di Rocco, Concezio ;
O'Connell, Mary A. ;
Gallo, Angela .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2008, 283 (11) :7251-7260
[9]   Recoding RNA editing of AZIN1 predisposes to hepatocellular carcinoma [J].
Chen, Lei Lei ;
Li, Yan ;
Lin, Chi Ho ;
Chan, Tim Hon Man ;
Chow, Raymond Kwok Kei ;
Song, Yangyang ;
Liu, Ming ;
Yuan, Yun-Fei ;
Fu, Li ;
Kong, Kar Lok ;
Qi, Lihua ;
Li, Yan ;
Zhang, Na ;
Tong, Amy Hin Yan ;
Kwong, Dora Lai-Wan ;
Man, Kwan ;
Lo, Chung Mau ;
Lok, Si ;
Tenen, Daniel G. ;
Guan, Xin-Yuan .
NATURE MEDICINE, 2013, 19 (02) :209-216
[10]   Editing of HIV-1 RNA by the double-stranded RNA deaminase ADAR1 stimulates viral infection [J].
Doria, Margherita ;
Neri, Francesca ;
Gallo, Angela ;
Farace, Maria Giulia ;
Michienzi, Alessandro .
NUCLEIC ACIDS RESEARCH, 2009, 37 (17) :5848-5858