RNA pseudouridylation: new insights into an old modification

被引:202
作者
Ge, Junhui [1 ]
Yu, Yi-Tao [1 ]
机构
[1] Univ Rochester, Med Ctr, Dept Biochem & Biophys, Ctr RNA Biol, Rochester, NY 14642 USA
基金
中国国家自然科学基金; 美国国家卫生研究院;
关键词
SITE RECOGNITION REGION; RIBOSOMAL-RNA; U2; SNRNA; SACCHAROMYCES-CEREVISIAE; CRYSTAL-STRUCTURE; SUBSTRATE RNA; GUIDE RNA; H/ACA; PSEUDOURIDINES; LOCALIZATION;
D O I
10.1016/j.tibs.2013.01.002
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pseudouridine is the most abundant post-transcriptionally modified nucleotide in various stable RNAs of all organisms. Pseudouridine is derived from uridine via base-specific isomerization, resulting in an extra hydrogen-bond donor that distinguishes it from other nucleotides. In eukaryotes, uridine-to-pseudouridine isomerization is catalyzed primarily by box H/ACA RNPs, ribonucleoproteins that act as pseudouridylases. When introduced into RNA, pseudouridine contributes significantly to RNA-mediated cellular processes. It was recently discovered that pseudouridylation can be induced by stress, suggesting a regulatory role for pseudouridine. It has also been reported that pseudouridine can be artificially introduced into mRNA by box H/ACA RNPs and that such introduction can mediate nonsense-to-sense codon conversion, thus demonstrating a new means of generating coding or protein diversity.
引用
收藏
页码:210 / 218
页数:9
相关论文
共 93 条
[1]   Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation [J].
Anderson, Bart R. ;
Muramatsu, Hiromi ;
Nallagatla, Subba R. ;
Bevilacqua, Philip C. ;
Sansing, Lauren H. ;
Weissman, Drew ;
Kariko, Katalin .
NUCLEIC ACIDS RESEARCH, 2010, 38 (17) :5884-5892
[2]   CRYSTAL-STRUCTURE OF UNMODIFIED TRNA(GLN) COMPLEXED WITH GLUTAMINYL-TRANSFER-RNA SYNTHETASE AND ATP SUGGESTS A POSSIBLE ROLE FOR PSEUDO-URIDINES IN STABILIZATION OF RNA STRUCTURE [J].
ARNEZ, JG ;
STEITZ, TA .
BIOCHEMISTRY, 1994, 33 (24) :7560-7567
[3]   A snoRNA that guides the two most conserved pseudouridine modifications within rRNA confers a growth advantage in yeast [J].
Badis, G ;
Fromont-Racine, M ;
Jacquier, A .
RNA, 2003, 9 (07) :771-779
[4]   RNA-Guided RNA modification: functional organization of the archaeal H/ACA RNP [J].
Baker, DL ;
Youssef, OA ;
Chastkofsky, MIR ;
Dy, DA ;
Terns, RM ;
Terns, MP .
GENES & DEVELOPMENT, 2005, 19 (10) :1238-1248
[5]   The RNA world of the nucleolus: Two major families of small RNAs defined by different box elements with related functions [J].
Balakin, AG ;
Smith, L ;
Fournier, MJ .
CELL, 1996, 86 (05) :823-834
[6]   Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy [J].
Baudin-Baillieu, Agnes ;
Fabret, Celine ;
Liang, Xue-hai ;
Piekna-Przybylska, Dorota ;
Fournier, Maurille J. ;
Rousset, Jean-Pierre .
NUCLEIC ACIDS RESEARCH, 2009, 37 (22) :7665-7677
[7]   The Saccharomyces cerevisiae U2 snRNA:pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA:Ψ-synthase also acting on tRNAs [J].
Behm-Ansmant, I ;
Urban, A ;
Ma, XJ ;
Yu, YT ;
Motorin, Y ;
Branlant, C .
RNA, 2003, 9 (11) :1371-1382
[8]   Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide RNA features [J].
Bernick, David L. ;
Dennis, Patrick P. ;
Hoechsmann, Matthias ;
Lowe, Todd M. .
RNA, 2012, 18 (03) :402-411
[9]  
Bjork Glenn R., 1995, P165
[10]   Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAs [J].
Bortolin, ML ;
Ganot, P ;
Kiss, T .
EMBO JOURNAL, 1999, 18 (02) :457-469