Regulation of miRNA biogenesis and turnover in the immune system

被引:73
作者
Bronevetsky, Yelena [1 ]
Ansel, K. Mark [1 ]
机构
[1] Univ Calif San Francisco, Dept Microbiol & Immunol, Sandler Asthma Basic Res Ctr, San Francisco, CA 94143 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
miRNA processing; miRNA turnover; Argonaute; RNA-BINDING PROTEIN; MICRORNA BIOGENESIS; POSTTRANSCRIPTIONAL REGULATION; RIBOSOMAL-RNA; FEEDBACK LOOP; C-MYC; CIRCULATING MICRORNAS; TRANSCRIPTION FACTORS; MEDIATED REGULATION; ARGONAUTE PROTEINS;
D O I
10.1111/imr.12059
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
MicroRNAs (miRNAs) have emerged as important regulators of gene expression in diverse biological processes ranging from cell proliferation and survival to organ development and immunity. Here, we review mechanisms that regulate the expression of miRNAs themselves in the immune system. Like protein-coding genes, miRNAs can be regulated at the transcriptional level, downstream of signaling pathways and circuits that activate or inhibit transcription factors and chromatin remodeling. The resulting primary miRNAs are processed into active mature miRNAs through a series of biochemical steps, and miRNA abundance can be regulated at each step of this biogenesis pathway. Recent work has uncovered regulation of mature miRNA turnover in the immune system as well. A better understanding of these processes and their regulation by immunogenic stimuli is critical for integrating miRNAs into current models of gene expression networks that determine cell identity and immune function.
引用
收藏
页码:304 / 316
页数:13
相关论文
共 129 条
  • [91] Prolyl 4-hydroxylation regulates Argonaute 2 stability
    Qi, Hank H.
    Ongusaha, Pat P.
    Myllyharju, Johanna
    Cheng, Dongmei
    Pakkanen, Outi
    Shi, Yujiang
    Lee, Sam W.
    Peng, Junmin
    Shi, Yang
    [J]. NATURE, 2008, 455 (7211) : 421 - U78
  • [92] Degradation of microRNAs by a family of exoribonucleases in Arabidopsis
    Ramachandran, Vanitharani
    Chen, Xuemei
    [J]. SCIENCE, 2008, 321 (5895) : 1490 - 1492
  • [93] Circulating microRNAs: Association with disease and potential use as biomarkers
    Reid, Glen
    Kirschner, Michaela B.
    van Zandwijk, Nico
    [J]. CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 2011, 80 (02) : 193 - 208
  • [94] The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
    Reinhart, BJ
    Slack, FJ
    Basson, M
    Pasquinelli, AE
    Bettinger, JC
    Rougvie, AE
    Horvitz, HR
    Ruvkun, G
    [J]. NATURE, 2000, 403 (6772) : 901 - 906
  • [95] Requirement of bic/microRNA-155 for normal immune function
    Rodriguez, Antony
    Vigorito, Elena
    Clare, Simon
    Warren, Madhuri V.
    Couttet, Philippe
    Soond, Dalya R.
    van Dongen, Stijn
    Grocock, Russell J.
    Das, Partha P.
    Miska, Eric A.
    Vetrie, David
    Okkenhaug, Klaus
    Enright, Anton J.
    Dougan, Gordon
    Turner, Martin
    Bradley, Allan
    [J]. SCIENCE, 2007, 316 (5824) : 608 - 611
  • [96] Phosphorylation of human Argonaute proteins affects small RNA binding
    Ruedel, Sabine
    Wang, Yanli
    Lenobel, Rene
    Koerner, Roman
    Hsiao, He-Hsuan
    Urlaub, Henning
    Patel, Dinshaw
    Meister, Gunter
    [J]. NUCLEIC ACIDS RESEARCH, 2011, 39 (06) : 2330 - 2343
  • [97] A feedback loop comprising lin-28 and let-7 controls pre-let-7 maturation during neural stem-cell commitment
    Rybak, Agnieszka
    Fuchs, Heiko
    Smirnova, Lena
    Brandt, Christine
    Pohl, Elena E.
    Nitsch, Robert
    Wulczyn, F. Gregory
    [J]. NATURE CELL BIOLOGY, 2008, 10 (08) : 987 - 993
  • [98] The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2
    Rybak, Agnieszka
    Fuchs, Heiko
    Hadian, Kamyar
    Smirnova, Lena
    Wulczyn, Ellery A.
    Michel, Geert
    Nitsch, Robert
    Krappmann, Daniel
    Wulczyn, F. Gregory
    [J]. NATURE CELL BIOLOGY, 2009, 11 (12) : 1411 - U58
  • [99] Transcriptional regulation of mammalian miRNA genes
    Schanen, Brian C.
    Li, Xiaoman
    [J]. GENOMICS, 2011, 97 (01) : 1 - 6
  • [100] miR-29ab1 Deficiency Identifies a Negative Feedback Loop Controlling Th1 Bias That Is Dysregulated in Multiple Sclerosis
    Smith, Kristen M.
    Guerau-de-Arellano, Mireia
    Costinean, Stefan
    Williams, Jessica L.
    Bottoni, Arianna
    Cox, Gina Mavrikis
    Satoskar, Abhay R.
    Croce, Carlo M.
    Racke, Michael K.
    Lovett-Racke, Amy E.
    Whitacre, Caroline C.
    [J]. JOURNAL OF IMMUNOLOGY, 2012, 189 (04) : 1567 - 1576