The Pediatric Imaging, Neurocognition, and Genetics (PING) Data Repository

被引：201

作者：

Jernigan, Terry L. ^{[1
,2
,3
]}

Brown, Timothy T. ^{[4
,5
]}

Hagler, Donald J., Jr. ^{[4
,6
]}

Akshoomoff, Natacha ^{[1
,3
]}

Bartsch, Hauke ^{[4
]}

Newman, Erik ^{[1
,3
]}

Thompson, Wesley K. ^{[3
,7
]}

Bloss, Cinnamon S. ^{[8
]}

Murray, Sarah S. ^{[9
]}

Schork, Nicholas ^{[10
]}

Kennedy, David N. ^{[11
]}

Kuperman, Joshua M. ^{[4
,6
]}

McCabe, Connor ^{[12
]}

Chung, Yoonho ^{[13
]}

Libiger, Ondrej ^{[8
]}

Maddox, Melanie ^{[1
]}

Casey, B. J. ^{[14
]}

Chang, Linda ^{[15
]}

Ernst, Thomas M. ^{[15
]}

Frazier, Jean A. ^{[11
]}

Gruen, Jeffrey R. ^{[16
,17
]}

Sowell, Elizabeth R. ^{[18
]}

Kenet, Tal ^{[19
]}

Kaufmann, Walter E. ^{[20
]}

Mostofsky, Stewart ^{[21
]}

Amaral, David G. ^{[22
]}

Dale, Anders M. ^{[2
,4
,5
,6
]}

机构：

[1] Univ Calif San Diego, Ctr Human Dev, La Jolla, CA 92093 USA

[2] Univ Calif San Diego, Dept Cognit Sci, La Jolla, CA 92093 USA

[3] Univ Calif San Diego, Dept Psychiat, La Jolla, CA 92093 USA

[4] Univ Calif San Diego, Multimodal Imaging Lab, La Jolla, CA 92093 USA

[5] Univ Calif San Diego, Dept Neurosci, La Jolla, CA 92093 USA

[6] Univ Calif San Diego, Dept Radiol, La Jolla, CA 92093 USA

[7] Univ Calif San Diego, Stein Inst Res Aging, La Jolla, CA 92093 USA

[8] Univ Calif San Diego, Qualcomm Inst, La Jolla, CA 92093 USA

[9] Univ Calif San Diego, Dept Pathol, La Jolla, CA 92093 USA

[10] J Craig Venter Inst, Human Biol, La Jolla, CA USA

[11] Univ Massachusetts, Sch Med, Dept Psychiat, Boston, MA 02125 USA

[12] Univ Washington, Dept Psychol, Seattle, WA 98195 USA

[13] Yale Univ, Dept Psychol, New Haven, CT 06520 USA

[14] Weill Cornell Med Coll, Sackler Inst Dev Psychobiol, New York, NY USA

[15] Univ Hawaii, Dept Med, Queens Med Ctr, Honolulu, HI 96822 USA

[16] Yale Univ, Sch Med, Dept Pediat, New Haven, CT 06510 USA

[17] Yale Univ, Sch Med, Dept Genet, New Haven, CT 06510 USA

[18] Univ So Calif, Dept Pediat, Childrens Hosp Los Angeles, Los Angeles, CA 90089 USA

[19] Massachusetts Gen Hosp, Athinoula A Martinos Ctr Biomed Imaging, Dept Neurol, Charlestown, MA USA

[20] Boston Childrens Hosp, Boston, MA USA

[21] Johns Hopkins Univ, Sch Med, Kennedy Krieger Inst, Baltimore, MD USA

[22] Univ Calif Davis, Dept Psychiat & Behav Sci, Davis, CA 95616 USA

来源：

NEUROIMAGE | 2016年 / 124卷

关键词：

PROSPECTIVE MOTION CORRECTION; SURFACE-BASED ANALYSIS; HUMAN CEREBRAL-CORTEX; GEOMETRICALLY ACCURATE; ALZHEIMERS-DISEASE; MRI; SEGMENTATION; THICKNESS; ADMIXTURE; UTILITY;

D O I：

10.1016/j.neuroimage.2015.04.057

中图分类号：

Q189 [神经科学];

学科分类号：

071006 ;

摘要：

The main objective of the multi-site Pediatric Imaging, Neurocognition, and Genetics (PING) study was to create a large repository of standardized measurements of behavioral and imaging phenotypes accompanied by whole genome genotyping acquired from typically-developing children varying widely in age (3 to 20 years). This cross-sectional study produced sharable data from 1493 children, and these data have been described in several publications focusing on brain and cognitive development. Researchers may gain access to these data by applying for an account on the PING portal and filing a data use agreement. Here we describe the recruiting and screening of the children and give a brief overview of the assessments performed, the imaging methods applied, the genetic data produced, and the numbers of cases for whom different data types are available. We also cite sources of more detailed information about the methods and data. Finally we describe the procedures for accessing the data and for using the PING data exploration portal. (C) 2015 Elsevier Inc. All rights reserved.

引用

页码：1149 / 1154

页数：6

共 45 条

[1] The NIH Toolbox Cognition Battery: Results From a Large Normative Developmental Sample (PING) [J].

Akshoomoff, Natacha ;

Newman, Erik ;

Thompson, Wesley K. ;

McCabe, Connor ;

Bloss, Cinnamon S. ;

Chang, Linda ;

Amaral, David G. ;

Casey, B. J. ;

Ernst, Thomas M. ;

Frazier, Jean A. ;

Gruen, Jeffrey R. ;

Kaufmann, Walter E. ;

Kenet, Tal ;

Kennedy, David N. ;

Libiger, Ondrej ;

Mostofsky, Stewart ;

Murray, Sarah S. ;

Sowell, Elizabeth R. ;

Schork, Nicholas ;

Dale, Anders M. ;

Jernigan, Terry L. .

NEUROPSYCHOLOGY, 2014, 28 (01) :1-10

[2] Fast model-based estimation of ancestry in unrelated individuals [J].

Alexander, David H. ;

Novembre, John ;

Lange, Kenneth .

GENOME RESEARCH, 2009, 19 (09) :1655-1664

[3] Integrating common and rare genetic variation in diverse human populations [J].

Altshuler, David M. ;

Gibbs, Richard A. ;

Peltonen, Leena ;

Dermitzakis, Emmanouil ;

Schaffner, Stephen F. ;

Yu, Fuli ;

Bonnen, Penelope E. ;

de Bakker, Paul I. W. ;

Deloukas, Panos ;

Gabriel, Stacey B. ;

Gwilliam, Rhian ;

Hunt, Sarah ;

Inouye, Michael ;

Jia, Xiaoming ;

Palotie, Aarno ;

Parkin, Melissa ;

Whittaker, Pamela ;

Chang, Kyle ;

Hawes, Alicia ;

Lewis, Lora R. ;

Ren, Yanru ;

Wheeler, David ;

Muzny, Donna Marie ;

Barnes, Chris ;

Darvishi, Katayoon ;

Hurles, Matthew ;

Korn, Joshua M. ;

Kristiansson, Kati ;

Lee, Charles ;

McCarroll, Steven A. ;

Nemesh, James ;

Keinan, Alon ;

Montgomery, Stephen B. ;

Pollack, Samuela ;

Price, Alkes L. ;

Soranzo, Nicole ;

Gonzaga-Jauregui, Claudia ;

Anttila, Verneri ;

Brodeur, Wendy ;

Daly, Mark J. ;

Leslie, Stephen ;

McVean, Gil ;

Moutsianas, Loukas ;

Nguyen, Huy ;

Zhang, Qingrun ;

Ghori, Mohammed J. R. ;

McGinnis, Ralph ;

McLaren, William ;

Takeuchi, Fumihiko ;

Grossman, Sharon R. .

NATURE, 2010, 467 (7311) :52-58

[4] A web-portal for interactive data exploration, visualization, and hypothesis testing [J].

Bartsch, Hauke ;

Thompson, Wesley K. ;

Jernigan, Terry L. ;

Dale, Anders M. .

FRONTIERS IN NEUROINFORMATICS, 2014, 8

[5] Neuroanatomical Assessment of Biological Maturity [J].

Brown, Timothy T. ;

Kuperman, Joshua M. ;

Chung, Yoonho ;

Erhart, Matthew ;

McCabe, Connor ;

Hagler, Donald J., Jr. ;

Venkatraman, Vijay K. ;

Akshoomoff, Natacha ;

Amaral, David G. ;

Bloss, Cinnamon S. ;

Casey, B. J. ;

Chang, Linda ;

Ernst, Thomas M. ;

Frazier, Jean A. ;

Gruen, Jeffrey R. ;

Kaufmann, Walter E. ;

Kenet, Tal ;

Kennedy, David N. ;

Murray, Sarah S. ;

Sowell, Elizabeth R. ;

Jernigan, Terry L. ;

Dale, Anders M. .

CURRENT BIOLOGY, 2012, 22 (18) :1693-1698

[6] Prospective motion correction of high-resolution magnetic resonance imaging data in children [J].

Brown, Timothy T. ;

Kuperman, Joshua M. ;

Erhart, Matthew ;

White, Nathan S. ;

Roddey, J. Cooper ;

Shankaranarayanan, Ajit ;

Han, Eric T. ;

Rettmann, Dan ;

Dale, Anders M. .

NEUROIMAGE, 2010, 53 (01) :139-145

[7]

Cann HM, 2002, SCIENCE, V296, P261

[8] A TECHNIQUE FOR ACCURATE MAGNETIC-RESONANCE-IMAGING IN THE PRESENCE OF FIELD INHOMOGENEITIES [J].

CHANG, H ;

FITZPATRICK, JM .

IEEE TRANSACTIONS ON MEDICAL IMAGING, 1992, 11 (03) :319-329

[9] Genetic topography of brain morphology [J].

Chen, Chi-Hua ;

Fiecas, Mark ;

Gutierrez, E. D. ;

Panizzon, Matthew S. ;

Eyler, Lisa T. ;

Vuoksimaa, Eero ;

Thompson, Wesley K. ;

Fennema-Notestine, Christine ;

Hagler, Donald J., Jr. ;

Jernigan, Terry L. ;

Neale, Michael C. ;

Franz, Carol E. ;

Lyons, Michael J. ;

Fischl, Bruce ;

Tsuang, Ming T. ;

Dale, Anders M. ;

Kremen, William S. .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (42) :17089-17094

[10] Hierarchical Genetic Organization of Human Cortical Surface Area [J].

Chen, Chi-Hua ;

Gutierrez, E. D. ;

Thompson, Wes ;

Panizzon, Matthew S. ;

Jernigan, Terry L. ;

Eyler, Lisa T. ;

Fennema-Notestine, Christine ;

Jak, Amy J. ;

Neale, Michael C. ;

Franz, Carol E. ;

Lyons, Michael J. ;

Grant, Michael D. ;

Fischl, Bruce ;

Seidman, Larry J. ;

Tsuang, Ming T. ;

Kremen, William S. ;

Dale, Anders M. .

SCIENCE, 2012, 335 (6076) :1634-1636

← 1 2 3 4 5 →