Structural Comparison of Mouse and Human α-Synuclein Amyloid Fibrils by Solid-State NMR

被引:59
作者
Lv, Guohua [1 ]
Kumar, Ashutosh [1 ]
Giller, Karin [1 ]
Orcellet, Maria L. [3 ]
Riedel, Dietmar [2 ]
Fernandez, Claudio O. [3 ]
Becker, Stefan [1 ]
Lange, Adam [1 ]
机构
[1] Max Planck Inst Biophys Chem, Dept NMR Based Struct Biol, D-37077 Gottingen, Germany
[2] Max Planck Inst Biophys Chem, Lab Elect Microscopy, D-37077 Gottingen, Germany
[3] Univ Nacl Rosario, Consejo Nacl Invest Cientif & Tecn, Inst Biol Mol & Celular Rosario, RA-2000 Rosario, Argentina
关键词
Parkinson's disease; magic-angle spinning; sequential assignment strategy; secondary structure; supramolecular arrangement; ANGLE-SPINNING NMR; NUCLEAR-MAGNETIC-RESONANCE; BETA-SHEET STRUCTURES; PARKINSONS-DISEASE; CROSS-POLARIZATION; INTERMOLECULAR ALIGNMENT; SECONDARY STRUCTURE; LEWY BODIES; PROTEIN; PRION;
D O I
10.1016/j.jmb.2012.04.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Fibrilar et-synuclein (AS) is the major component of Lewy bodies, the pathological hallmark of Parkinson's disease. Mouse AS (mAS) aggregates much faster than human AS (hAS), although mAS differs from hAS at only seven positions in its primary sequence. Currently, little is known about the site-specific structural differences between mAS and hAS fibrils. Here, we applied state-of-the-art solid-state nuclear magnetic resonance (ssNMR) methods to structurally characterize mAS fibrils. The assignment strategy employed a set of high-resolution 2D and 3D ssNMR spectra recorded on uniformly [C-13, N-15], [1-C-13]glucose, and [2-C-13]glucose labeled mAS fibrils. An almost complete resonance assignment (96% of backbone amide N-15 and 93% of all C-13 nuclei) was obtained for residues from Gly41 to Val95, which form the core of mAS fibrils. Six beta-strands were identified to be within the fibril core of mAS based on a secondary chemical shift and NHHC analysis. Intermolecular C-13:N-15 labeled restraints obtained from mixed 1:1 C-13/N-15-labeled mAS fibrils reveal a parallel, in-register supramolecular beta-sheet arrangement. The results were compared in detail to recent structural studies on hAS fibrils and indicate the presence of a structurally conserved motif comprising residues Glu61-Lys80. (C) 2012 Elsevier Ltd. All rights reserved.
引用
收藏
页码:99 / 111
页数:13
相关论文
共 69 条
[1]  
Baba M, 1998, AM J PATHOL, V152, P879
[2]  
Baldus M, 1998, MOL PHYS, V95, P1197, DOI 10.1080/00268979809483251
[3]   α-Synuclein occurs physiologically as a helically folded tetramer that resists aggregation [J].
Bartels, Tim ;
Choi, Joanna G. ;
Selkoe, Dennis J. .
NATURE, 2011, 477 (7362) :107-U123
[4]   Intermolecular Structure Determination of Amyloid Fibrils with Magic-Angle Spinning and Dynamic Nuclear Polarization NMR [J].
Bayro, Marvin J. ;
Debelouchina, Galia T. ;
Eddy, Matthew T. ;
Birkett, Neil R. ;
MacPhee, Catherine E. ;
Rosay, Melanie ;
Maas, Werner E. ;
Dobson, Christopher M. ;
Griffin, Robert G. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (35) :13967-13974
[5]   A New Structural Model of Aβ40 Fibrils [J].
Bertini, Ivano ;
Gonnelli, Leonardo ;
Luchinat, Claudio ;
Mao, Jiafei ;
Nesi, Antonella .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2011, 133 (40) :16013-16022
[6]   Structure of the amantadine binding site of influenza M2 proton channels in lipid bilayers [J].
Cady, Sarah D. ;
Schmidt-Rohr, Klaus ;
Wang, Jun ;
Soto, Cinque S. ;
DeGrado, William F. ;
Hong, Mei .
NATURE, 2010, 463 (7281) :689-U127
[7]  
Cavanagh J, 2007, PROTEIN NMR SPECTROSCOPY: PRINCIPLES AND PRACTICE, 2ND EDITION, P1
[8]   Structural and dynamical characterization of tubular HIV-1 capsid protein assemblies by solid state nuclear magnetic resonance and electron microscopy [J].
Chen, Bo ;
Tycko, Robert .
PROTEIN SCIENCE, 2010, 19 (04) :716-730
[9]   Evidence of fibril-like β-sheet structures in a neurotoxic amyloid intermediate of Alzheimer's β-amyloid [J].
Chimon, Sandra ;
Shaibat, Medhat A. ;
Jones, Christopher R. ;
Calero, Diana C. ;
Aizezi, Buzulagu ;
Ishii, Yoshitaka .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2007, 14 (12) :1157-1164
[10]   Structured Regions of α-Synuclein Fibrils Include the Early-Onset Parkinson's Disease Mutation Sites [J].
Comellas, Gemma ;
Lemkau, Luisel R. ;
Nieuwkoop, Andrew J. ;
Kloepper, Kathryn D. ;
Ladror, Daniel T. ;
Ebisu, Reika ;
Woods, Wendy S. ;
Lipton, Andrew S. ;
George, Julia M. ;
Rienstra, Chad M. .
JOURNAL OF MOLECULAR BIOLOGY, 2011, 411 (04) :881-895